Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28103 | 84532;84533;84534 | chr2:178561825;178561824;178561823 | chr2:179426552;179426551;179426550 |
N2AB | 26462 | 79609;79610;79611 | chr2:178561825;178561824;178561823 | chr2:179426552;179426551;179426550 |
N2A | 25535 | 76828;76829;76830 | chr2:178561825;178561824;178561823 | chr2:179426552;179426551;179426550 |
N2B | 19038 | 57337;57338;57339 | chr2:178561825;178561824;178561823 | chr2:179426552;179426551;179426550 |
Novex-1 | 19163 | 57712;57713;57714 | chr2:178561825;178561824;178561823 | chr2:179426552;179426551;179426550 |
Novex-2 | 19230 | 57913;57914;57915 | chr2:178561825;178561824;178561823 | chr2:179426552;179426551;179426550 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs749278779 | 0.145 | None | N | 0.049 | 0.13 | 0.0401082797425 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/Q | rs749278779 | 0.145 | None | N | 0.049 | 0.13 | 0.0401082797425 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/Q | rs749278779 | 0.145 | None | N | 0.049 | 0.13 | 0.0401082797425 | gnomAD-4.0.0 | 3.84412E-06 | None | None | None | None | I | None | 0 | 5.08613E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1689 | likely_benign | 0.1442 | benign | -0.22 | Destabilizing | 0.002 | N | 0.244 | neutral | None | None | None | None | I |
H/C | 0.1295 | likely_benign | 0.1257 | benign | 0.488 | Stabilizing | 0.497 | N | 0.345 | neutral | None | None | None | None | I |
H/D | 0.1326 | likely_benign | 0.1223 | benign | -0.298 | Destabilizing | None | N | 0.107 | neutral | N | 0.417797306 | None | None | I |
H/E | 0.1495 | likely_benign | 0.1322 | benign | -0.221 | Destabilizing | None | N | 0.049 | neutral | None | None | None | None | I |
H/F | 0.2954 | likely_benign | 0.2696 | benign | 0.925 | Stabilizing | 0.044 | N | 0.387 | neutral | None | None | None | None | I |
H/G | 0.2364 | likely_benign | 0.2034 | benign | -0.565 | Destabilizing | 0.004 | N | 0.291 | neutral | None | None | None | None | I |
H/I | 0.1768 | likely_benign | 0.1652 | benign | 0.709 | Stabilizing | 0.009 | N | 0.38 | neutral | None | None | None | None | I |
H/K | 0.1726 | likely_benign | 0.1455 | benign | -0.118 | Destabilizing | 0.004 | N | 0.205 | neutral | None | None | None | None | I |
H/L | 0.0937 | likely_benign | 0.0918 | benign | 0.709 | Stabilizing | None | N | 0.218 | neutral | N | 0.373371739 | None | None | I |
H/M | 0.2734 | likely_benign | 0.2425 | benign | 0.46 | Stabilizing | 0.138 | N | 0.383 | neutral | None | None | None | None | I |
H/N | 0.063 | likely_benign | 0.0643 | benign | -0.241 | Destabilizing | 0.007 | N | 0.186 | neutral | N | 0.426203359 | None | None | I |
H/P | 0.5046 | ambiguous | 0.4728 | ambiguous | 0.422 | Stabilizing | 0.028 | N | 0.356 | neutral | N | 0.476325535 | None | None | I |
H/Q | 0.0892 | likely_benign | 0.0858 | benign | -0.045 | Destabilizing | None | N | 0.049 | neutral | N | 0.326367226 | None | None | I |
H/R | 0.1061 | likely_benign | 0.0967 | benign | -0.733 | Destabilizing | 0.007 | N | 0.203 | neutral | N | 0.415391719 | None | None | I |
H/S | 0.1321 | likely_benign | 0.1143 | benign | -0.154 | Destabilizing | None | N | 0.111 | neutral | None | None | None | None | I |
H/T | 0.1262 | likely_benign | 0.1103 | benign | 0.028 | Stabilizing | 0.004 | N | 0.288 | neutral | None | None | None | None | I |
H/V | 0.132 | likely_benign | 0.1241 | benign | 0.422 | Stabilizing | 0.009 | N | 0.302 | neutral | None | None | None | None | I |
H/W | 0.4471 | ambiguous | 0.3985 | ambiguous | 1.127 | Stabilizing | 0.788 | D | 0.316 | neutral | None | None | None | None | I |
H/Y | 0.1026 | likely_benign | 0.0987 | benign | 1.23 | Stabilizing | 0.065 | N | 0.264 | neutral | N | 0.433305477 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.