Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28104 | 84535;84536;84537 | chr2:178561822;178561821;178561820 | chr2:179426549;179426548;179426547 |
N2AB | 26463 | 79612;79613;79614 | chr2:178561822;178561821;178561820 | chr2:179426549;179426548;179426547 |
N2A | 25536 | 76831;76832;76833 | chr2:178561822;178561821;178561820 | chr2:179426549;179426548;179426547 |
N2B | 19039 | 57340;57341;57342 | chr2:178561822;178561821;178561820 | chr2:179426549;179426548;179426547 |
Novex-1 | 19164 | 57715;57716;57717 | chr2:178561822;178561821;178561820 | chr2:179426549;179426548;179426547 |
Novex-2 | 19231 | 57916;57917;57918 | chr2:178561822;178561821;178561820 | chr2:179426549;179426548;179426547 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs778359308 | -1.038 | None | N | 0.133 | 0.131 | 0.223847106136 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/V | rs778359308 | -1.038 | None | N | 0.133 | 0.131 | 0.223847106136 | gnomAD-4.0.0 | 3.18337E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.88296E-05 | 0 | 0 | 1.43291E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.128 | likely_benign | 0.1321 | benign | -1.333 | Destabilizing | 0.016 | N | 0.447 | neutral | None | None | None | None | I |
I/C | 0.4404 | ambiguous | 0.4448 | ambiguous | -0.773 | Destabilizing | 0.676 | D | 0.551 | neutral | None | None | None | None | I |
I/D | 0.4487 | ambiguous | 0.4347 | ambiguous | -0.815 | Destabilizing | 0.214 | N | 0.591 | neutral | None | None | None | None | I |
I/E | 0.3489 | ambiguous | 0.3428 | ambiguous | -0.86 | Destabilizing | 0.072 | N | 0.564 | neutral | None | None | None | None | I |
I/F | 0.1433 | likely_benign | 0.1426 | benign | -0.991 | Destabilizing | 0.214 | N | 0.463 | neutral | None | None | None | None | I |
I/G | 0.3607 | ambiguous | 0.3561 | ambiguous | -1.595 | Destabilizing | 0.072 | N | 0.561 | neutral | None | None | None | None | I |
I/H | 0.3315 | likely_benign | 0.3266 | benign | -0.773 | Destabilizing | 0.864 | D | 0.579 | neutral | None | None | None | None | I |
I/K | 0.2615 | likely_benign | 0.2458 | benign | -0.937 | Destabilizing | 0.029 | N | 0.526 | neutral | N | 0.447464065 | None | None | I |
I/L | 0.0836 | likely_benign | 0.0891 | benign | -0.716 | Destabilizing | None | N | 0.131 | neutral | N | 0.468706129 | None | None | I |
I/M | 0.0737 | likely_benign | 0.0763 | benign | -0.535 | Destabilizing | 0.171 | N | 0.497 | neutral | N | 0.45443011 | None | None | I |
I/N | 0.1475 | likely_benign | 0.1496 | benign | -0.688 | Destabilizing | 0.214 | N | 0.586 | neutral | None | None | None | None | I |
I/P | 0.2518 | likely_benign | 0.2377 | benign | -0.889 | Destabilizing | 0.356 | N | 0.591 | neutral | None | None | None | None | I |
I/Q | 0.2593 | likely_benign | 0.2579 | benign | -0.92 | Destabilizing | 0.214 | N | 0.586 | neutral | None | None | None | None | I |
I/R | 0.1878 | likely_benign | 0.1841 | benign | -0.275 | Destabilizing | None | N | 0.42 | neutral | N | 0.464356315 | None | None | I |
I/S | 0.1305 | likely_benign | 0.1354 | benign | -1.222 | Destabilizing | 0.038 | N | 0.519 | neutral | None | None | None | None | I |
I/T | 0.0736 | likely_benign | 0.08 | benign | -1.16 | Destabilizing | None | N | 0.282 | neutral | N | 0.369926002 | None | None | I |
I/V | 0.058 | likely_benign | 0.0591 | benign | -0.889 | Destabilizing | None | N | 0.133 | neutral | N | 0.429513023 | None | None | I |
I/W | 0.6756 | likely_pathogenic | 0.6574 | pathogenic | -1.016 | Destabilizing | 0.864 | D | 0.616 | neutral | None | None | None | None | I |
I/Y | 0.3977 | ambiguous | 0.3811 | ambiguous | -0.815 | Destabilizing | 0.356 | N | 0.568 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.