Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2811 | 8656;8657;8658 | chr2:178770270;178770269;178770268 | chr2:179634997;179634996;179634995 |
N2AB | 2811 | 8656;8657;8658 | chr2:178770270;178770269;178770268 | chr2:179634997;179634996;179634995 |
N2A | 2811 | 8656;8657;8658 | chr2:178770270;178770269;178770268 | chr2:179634997;179634996;179634995 |
N2B | 2765 | 8518;8519;8520 | chr2:178770270;178770269;178770268 | chr2:179634997;179634996;179634995 |
Novex-1 | 2765 | 8518;8519;8520 | chr2:178770270;178770269;178770268 | chr2:179634997;179634996;179634995 |
Novex-2 | 2765 | 8518;8519;8520 | chr2:178770270;178770269;178770268 | chr2:179634997;179634996;179634995 |
Novex-3 | 2811 | 8656;8657;8658 | chr2:178770270;178770269;178770268 | chr2:179634997;179634996;179634995 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1574566372 | None | 0.64 | N | 0.451 | 0.176 | 0.12205267543 | gnomAD-4.0.0 | 1.59047E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85647E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0779 | likely_benign | 0.0828 | benign | -0.511 | Destabilizing | 0.64 | D | 0.451 | neutral | N | 0.444736762 | None | None | N |
T/C | 0.4516 | ambiguous | 0.5557 | ambiguous | -0.258 | Destabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | N |
T/D | 0.4288 | ambiguous | 0.5045 | ambiguous | -0.078 | Destabilizing | 0.919 | D | 0.523 | neutral | None | None | None | None | N |
T/E | 0.3685 | ambiguous | 0.4014 | ambiguous | -0.117 | Destabilizing | 0.851 | D | 0.505 | neutral | None | None | None | None | N |
T/F | 0.2994 | likely_benign | 0.383 | ambiguous | -0.747 | Destabilizing | 0.976 | D | 0.674 | neutral | None | None | None | None | N |
T/G | 0.2576 | likely_benign | 0.3437 | ambiguous | -0.718 | Destabilizing | 0.851 | D | 0.569 | neutral | None | None | None | None | N |
T/H | 0.3085 | likely_benign | 0.3856 | ambiguous | -0.981 | Destabilizing | 0.997 | D | 0.663 | neutral | None | None | None | None | N |
T/I | 0.1891 | likely_benign | 0.2207 | benign | -0.069 | Destabilizing | 0.811 | D | 0.504 | neutral | D | 0.535603047 | None | None | N |
T/K | 0.2836 | likely_benign | 0.3191 | benign | -0.595 | Destabilizing | 0.851 | D | 0.515 | neutral | None | None | None | None | N |
T/L | 0.1076 | likely_benign | 0.1386 | benign | -0.069 | Destabilizing | 0.851 | D | 0.48 | neutral | None | None | None | None | N |
T/M | 0.0833 | likely_benign | 0.0932 | benign | 0.124 | Stabilizing | 0.988 | D | 0.599 | neutral | None | None | None | None | N |
T/N | 0.1313 | likely_benign | 0.1669 | benign | -0.387 | Destabilizing | 0.968 | D | 0.471 | neutral | N | 0.450845952 | None | None | N |
T/P | 0.1567 | likely_benign | 0.1871 | benign | -0.185 | Destabilizing | 0.984 | D | 0.587 | neutral | N | 0.435403847 | None | None | N |
T/Q | 0.2552 | likely_benign | 0.2956 | benign | -0.574 | Destabilizing | 0.507 | D | 0.401 | neutral | None | None | None | None | N |
T/R | 0.234 | likely_benign | 0.2556 | benign | -0.306 | Destabilizing | 0.976 | D | 0.583 | neutral | None | None | None | None | N |
T/S | 0.1022 | likely_benign | 0.127 | benign | -0.602 | Destabilizing | 0.103 | N | 0.272 | neutral | N | 0.443230576 | None | None | N |
T/V | 0.114 | likely_benign | 0.1347 | benign | -0.185 | Destabilizing | 0.034 | N | 0.28 | neutral | None | None | None | None | N |
T/W | 0.6655 | likely_pathogenic | 0.7284 | pathogenic | -0.738 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
T/Y | 0.386 | ambiguous | 0.456 | ambiguous | -0.492 | Destabilizing | 0.988 | D | 0.675 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.