Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28111 | 84556;84557;84558 | chr2:178561801;178561800;178561799 | chr2:179426528;179426527;179426526 |
N2AB | 26470 | 79633;79634;79635 | chr2:178561801;178561800;178561799 | chr2:179426528;179426527;179426526 |
N2A | 25543 | 76852;76853;76854 | chr2:178561801;178561800;178561799 | chr2:179426528;179426527;179426526 |
N2B | 19046 | 57361;57362;57363 | chr2:178561801;178561800;178561799 | chr2:179426528;179426527;179426526 |
Novex-1 | 19171 | 57736;57737;57738 | chr2:178561801;178561800;178561799 | chr2:179426528;179426527;179426526 |
Novex-2 | 19238 | 57937;57938;57939 | chr2:178561801;178561800;178561799 | chr2:179426528;179426527;179426526 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs1060500463 | None | 0.773 | N | 0.517 | 0.2 | 0.335910606209 | gnomAD-4.0.0 | 3.1835E-06 | None | None | None | None | N | None | 5.65675E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02499E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9163 | likely_pathogenic | 0.9172 | pathogenic | 0.044 | Stabilizing | 0.845 | D | 0.572 | neutral | None | None | None | None | N |
R/C | 0.5758 | likely_pathogenic | 0.6004 | pathogenic | -0.207 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
R/D | 0.9623 | likely_pathogenic | 0.9675 | pathogenic | -0.199 | Destabilizing | 0.975 | D | 0.594 | neutral | None | None | None | None | N |
R/E | 0.8774 | likely_pathogenic | 0.8899 | pathogenic | -0.152 | Destabilizing | 0.916 | D | 0.578 | neutral | None | None | None | None | N |
R/F | 0.9465 | likely_pathogenic | 0.9472 | pathogenic | -0.252 | Destabilizing | 0.987 | D | 0.648 | neutral | None | None | None | None | N |
R/G | 0.7328 | likely_pathogenic | 0.7665 | pathogenic | -0.111 | Destabilizing | 0.892 | D | 0.542 | neutral | N | 0.521020462 | None | None | N |
R/H | 0.4139 | ambiguous | 0.4071 | ambiguous | -0.584 | Destabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | N |
R/I | 0.9063 | likely_pathogenic | 0.905 | pathogenic | 0.408 | Stabilizing | 0.967 | D | 0.653 | neutral | N | 0.486510525 | None | None | N |
R/K | 0.3358 | likely_benign | 0.3367 | benign | -0.099 | Destabilizing | 0.773 | D | 0.517 | neutral | N | 0.482558074 | None | None | N |
R/L | 0.8064 | likely_pathogenic | 0.8042 | pathogenic | 0.408 | Stabilizing | 0.845 | D | 0.558 | neutral | None | None | None | None | N |
R/M | 0.8578 | likely_pathogenic | 0.861 | pathogenic | -0.026 | Destabilizing | 0.999 | D | 0.63 | neutral | None | None | None | None | N |
R/N | 0.9468 | likely_pathogenic | 0.9477 | pathogenic | 0.018 | Stabilizing | 0.975 | D | 0.602 | neutral | None | None | None | None | N |
R/P | 0.9735 | likely_pathogenic | 0.9767 | pathogenic | 0.305 | Stabilizing | 0.987 | D | 0.659 | neutral | None | None | None | None | N |
R/Q | 0.4059 | ambiguous | 0.4153 | ambiguous | -0.038 | Destabilizing | 0.987 | D | 0.612 | neutral | None | None | None | None | N |
R/S | 0.929 | likely_pathogenic | 0.933 | pathogenic | -0.219 | Destabilizing | 0.805 | D | 0.586 | neutral | N | 0.475016026 | None | None | N |
R/T | 0.8639 | likely_pathogenic | 0.8768 | pathogenic | -0.057 | Destabilizing | 0.025 | N | 0.361 | neutral | N | 0.486883671 | None | None | N |
R/V | 0.9164 | likely_pathogenic | 0.919 | pathogenic | 0.305 | Stabilizing | 0.95 | D | 0.573 | neutral | None | None | None | None | N |
R/W | 0.6182 | likely_pathogenic | 0.6282 | pathogenic | -0.4 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | N |
R/Y | 0.866 | likely_pathogenic | 0.8614 | pathogenic | 0.015 | Stabilizing | 0.996 | D | 0.653 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.