Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28114 | 84565;84566;84567 | chr2:178561792;178561791;178561790 | chr2:179426519;179426518;179426517 |
N2AB | 26473 | 79642;79643;79644 | chr2:178561792;178561791;178561790 | chr2:179426519;179426518;179426517 |
N2A | 25546 | 76861;76862;76863 | chr2:178561792;178561791;178561790 | chr2:179426519;179426518;179426517 |
N2B | 19049 | 57370;57371;57372 | chr2:178561792;178561791;178561790 | chr2:179426519;179426518;179426517 |
Novex-1 | 19174 | 57745;57746;57747 | chr2:178561792;178561791;178561790 | chr2:179426519;179426518;179426517 |
Novex-2 | 19241 | 57946;57947;57948 | chr2:178561792;178561791;178561790 | chr2:179426519;179426518;179426517 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1703767853 | None | 0.426 | N | 0.475 | 0.11 | 0.404034981753 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs1703767853 | None | 0.426 | N | 0.475 | 0.11 | 0.404034981753 | gnomAD-4.0.0 | 3.09873E-06 | None | None | None | None | I | None | 0 | 1.66728E-05 | None | 0 | 0 | None | 1.56255E-05 | 0 | 2.5429E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6901 | likely_pathogenic | 0.6508 | pathogenic | -1.734 | Destabilizing | 0.033 | N | 0.369 | neutral | None | None | None | None | I |
I/C | 0.77 | likely_pathogenic | 0.7422 | pathogenic | -1.289 | Destabilizing | 0.997 | D | 0.641 | neutral | None | None | None | None | I |
I/D | 0.9812 | likely_pathogenic | 0.9725 | pathogenic | -0.84 | Destabilizing | 0.987 | D | 0.762 | deleterious | None | None | None | None | I |
I/E | 0.9462 | likely_pathogenic | 0.9256 | pathogenic | -0.691 | Destabilizing | 0.975 | D | 0.745 | deleterious | None | None | None | None | I |
I/F | 0.1934 | likely_benign | 0.2125 | benign | -0.911 | Destabilizing | 0.983 | D | 0.497 | neutral | N | 0.402385137 | None | None | I |
I/G | 0.9184 | likely_pathogenic | 0.9061 | pathogenic | -2.183 | Highly Destabilizing | 0.95 | D | 0.678 | prob.neutral | None | None | None | None | I |
I/H | 0.8738 | likely_pathogenic | 0.848 | pathogenic | -1.282 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | I |
I/K | 0.8607 | likely_pathogenic | 0.8145 | pathogenic | -1.161 | Destabilizing | 0.975 | D | 0.749 | deleterious | None | None | None | None | I |
I/L | 0.1064 | likely_benign | 0.1104 | benign | -0.507 | Destabilizing | 0.63 | D | 0.477 | neutral | N | 0.427184794 | None | None | I |
I/M | 0.0935 | likely_benign | 0.1013 | benign | -0.592 | Destabilizing | 0.994 | D | 0.505 | neutral | N | 0.475421458 | None | None | I |
I/N | 0.7706 | likely_pathogenic | 0.7255 | pathogenic | -1.347 | Destabilizing | 0.983 | D | 0.803 | deleterious | N | 0.501349551 | None | None | I |
I/P | 0.9831 | likely_pathogenic | 0.9789 | pathogenic | -0.889 | Destabilizing | 0.987 | D | 0.793 | deleterious | None | None | None | None | I |
I/Q | 0.828 | likely_pathogenic | 0.7973 | pathogenic | -1.244 | Destabilizing | 0.987 | D | 0.813 | deleterious | None | None | None | None | I |
I/R | 0.7919 | likely_pathogenic | 0.7413 | pathogenic | -0.873 | Destabilizing | 0.987 | D | 0.797 | deleterious | None | None | None | None | I |
I/S | 0.7061 | likely_pathogenic | 0.6814 | pathogenic | -2.133 | Highly Destabilizing | 0.805 | D | 0.571 | neutral | N | 0.474344526 | None | None | I |
I/T | 0.6537 | likely_pathogenic | 0.6165 | pathogenic | -1.828 | Destabilizing | 0.892 | D | 0.521 | neutral | N | 0.484675659 | None | None | I |
I/V | 0.111 | likely_benign | 0.1074 | benign | -0.889 | Destabilizing | 0.426 | N | 0.475 | neutral | N | 0.444151615 | None | None | I |
I/W | 0.8811 | likely_pathogenic | 0.8705 | pathogenic | -1.058 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | I |
I/Y | 0.6627 | likely_pathogenic | 0.6422 | pathogenic | -0.786 | Destabilizing | 0.996 | D | 0.648 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.