Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28119 | 84580;84581;84582 | chr2:178561777;178561776;178561775 | chr2:179426504;179426503;179426502 |
N2AB | 26478 | 79657;79658;79659 | chr2:178561777;178561776;178561775 | chr2:179426504;179426503;179426502 |
N2A | 25551 | 76876;76877;76878 | chr2:178561777;178561776;178561775 | chr2:179426504;179426503;179426502 |
N2B | 19054 | 57385;57386;57387 | chr2:178561777;178561776;178561775 | chr2:179426504;179426503;179426502 |
Novex-1 | 19179 | 57760;57761;57762 | chr2:178561777;178561776;178561775 | chr2:179426504;179426503;179426502 |
Novex-2 | 19246 | 57961;57962;57963 | chr2:178561777;178561776;178561775 | chr2:179426504;179426503;179426502 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1461216101 | -2.097 | 1.0 | D | 0.851 | 0.814 | 0.951666208339 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/P | rs1461216101 | -2.097 | 1.0 | D | 0.851 | 0.814 | 0.951666208339 | gnomAD-4.0.0 | 1.59173E-06 | None | None | None | None | I | None | 0 | 2.28707E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9609 | likely_pathogenic | 0.957 | pathogenic | -2.682 | Highly Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | I |
L/C | 0.9411 | likely_pathogenic | 0.9318 | pathogenic | -2.678 | Highly Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
L/D | 0.999 | likely_pathogenic | 0.9988 | pathogenic | -2.554 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
L/E | 0.9949 | likely_pathogenic | 0.9936 | pathogenic | -2.373 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
L/F | 0.862 | likely_pathogenic | 0.8333 | pathogenic | -1.876 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
L/G | 0.9876 | likely_pathogenic | 0.9854 | pathogenic | -3.173 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
L/H | 0.9867 | likely_pathogenic | 0.9808 | pathogenic | -2.404 | Highly Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | I |
L/I | 0.5076 | ambiguous | 0.5004 | ambiguous | -1.284 | Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | I |
L/K | 0.9888 | likely_pathogenic | 0.9856 | pathogenic | -2.022 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
L/M | 0.4891 | ambiguous | 0.4563 | ambiguous | -1.529 | Destabilizing | 1.0 | D | 0.846 | deleterious | D | 0.612042701 | None | None | I |
L/N | 0.9898 | likely_pathogenic | 0.9862 | pathogenic | -2.287 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | I |
L/P | 0.9891 | likely_pathogenic | 0.9876 | pathogenic | -1.73 | Destabilizing | 1.0 | D | 0.851 | deleterious | D | 0.669730258 | None | None | I |
L/Q | 0.9788 | likely_pathogenic | 0.9723 | pathogenic | -2.253 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.685749619 | None | None | I |
L/R | 0.9814 | likely_pathogenic | 0.9764 | pathogenic | -1.618 | Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.685749619 | None | None | I |
L/S | 0.9923 | likely_pathogenic | 0.9911 | pathogenic | -3.115 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
L/T | 0.9674 | likely_pathogenic | 0.9658 | pathogenic | -2.781 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
L/V | 0.5576 | ambiguous | 0.5545 | ambiguous | -1.73 | Destabilizing | 0.999 | D | 0.845 | deleterious | D | 0.608126262 | None | None | I |
L/W | 0.9849 | likely_pathogenic | 0.9809 | pathogenic | -2.023 | Highly Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
L/Y | 0.984 | likely_pathogenic | 0.9781 | pathogenic | -1.799 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.