Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28120 | 84583;84584;84585 | chr2:178561774;178561773;178561772 | chr2:179426501;179426500;179426499 |
N2AB | 26479 | 79660;79661;79662 | chr2:178561774;178561773;178561772 | chr2:179426501;179426500;179426499 |
N2A | 25552 | 76879;76880;76881 | chr2:178561774;178561773;178561772 | chr2:179426501;179426500;179426499 |
N2B | 19055 | 57388;57389;57390 | chr2:178561774;178561773;178561772 | chr2:179426501;179426500;179426499 |
Novex-1 | 19180 | 57763;57764;57765 | chr2:178561774;178561773;178561772 | chr2:179426501;179426500;179426499 |
Novex-2 | 19247 | 57964;57965;57966 | chr2:178561774;178561773;178561772 | chr2:179426501;179426500;179426499 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | None | N | 0.109 | 0.112 | 0.0762999501168 | gnomAD-4.0.0 | 1.36861E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79902E-06 | 0 | 0 |
T/K | rs1261670625 | -0.448 | 0.055 | N | 0.421 | 0.111 | 0.0762999501168 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
T/K | rs1261670625 | -0.448 | 0.055 | N | 0.421 | 0.111 | 0.0762999501168 | gnomAD-4.0.0 | 2.60035E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.41813E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0814 | likely_benign | 0.0823 | benign | -0.742 | Destabilizing | None | N | 0.071 | neutral | N | 0.52128982 | None | None | N |
T/C | 0.3528 | ambiguous | 0.4047 | ambiguous | -0.388 | Destabilizing | 0.356 | N | 0.419 | neutral | None | None | None | None | N |
T/D | 0.3968 | ambiguous | 0.4001 | ambiguous | 0.416 | Stabilizing | 0.072 | N | 0.432 | neutral | None | None | None | None | N |
T/E | 0.2777 | likely_benign | 0.2692 | benign | 0.358 | Stabilizing | 0.072 | N | 0.38 | neutral | None | None | None | None | N |
T/F | 0.2375 | likely_benign | 0.2517 | benign | -1.212 | Destabilizing | 0.214 | N | 0.467 | neutral | None | None | None | None | N |
T/G | 0.2323 | likely_benign | 0.2596 | benign | -0.886 | Destabilizing | 0.072 | N | 0.387 | neutral | None | None | None | None | N |
T/H | 0.2164 | likely_benign | 0.2091 | benign | -1.153 | Destabilizing | 0.864 | D | 0.429 | neutral | None | None | None | None | N |
T/I | 0.104 | likely_benign | 0.1108 | benign | -0.473 | Destabilizing | None | N | 0.109 | neutral | N | 0.43605778 | None | None | N |
T/K | 0.1615 | likely_benign | 0.1386 | benign | -0.345 | Destabilizing | 0.055 | N | 0.421 | neutral | N | 0.41594908 | None | None | N |
T/L | 0.0841 | likely_benign | 0.0879 | benign | -0.473 | Destabilizing | 0.002 | N | 0.329 | neutral | None | None | None | None | N |
T/M | 0.0851 | likely_benign | 0.0903 | benign | -0.189 | Destabilizing | 0.214 | N | 0.429 | neutral | None | None | None | None | N |
T/N | 0.1043 | likely_benign | 0.1024 | benign | -0.168 | Destabilizing | 0.072 | N | 0.378 | neutral | None | None | None | None | N |
T/P | 0.2424 | likely_benign | 0.2232 | benign | -0.534 | Destabilizing | 0.295 | N | 0.453 | neutral | N | 0.489107872 | None | None | N |
T/Q | 0.1768 | likely_benign | 0.171 | benign | -0.38 | Destabilizing | 0.356 | N | 0.44 | neutral | None | None | None | None | N |
T/R | 0.1576 | likely_benign | 0.1371 | benign | -0.104 | Destabilizing | 0.295 | N | 0.453 | neutral | N | 0.504202783 | None | None | N |
T/S | 0.1082 | likely_benign | 0.1147 | benign | -0.484 | Destabilizing | 0.002 | N | 0.13 | neutral | N | 0.47442138 | None | None | N |
T/V | 0.0896 | likely_benign | 0.0996 | benign | -0.534 | Destabilizing | None | N | 0.064 | neutral | None | None | None | None | N |
T/W | 0.6159 | likely_pathogenic | 0.6333 | pathogenic | -1.135 | Destabilizing | 0.864 | D | 0.471 | neutral | None | None | None | None | N |
T/Y | 0.2896 | likely_benign | 0.292 | benign | -0.877 | Destabilizing | 0.356 | N | 0.459 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.