Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28123 | 84592;84593;84594 | chr2:178561765;178561764;178561763 | chr2:179426492;179426491;179426490 |
N2AB | 26482 | 79669;79670;79671 | chr2:178561765;178561764;178561763 | chr2:179426492;179426491;179426490 |
N2A | 25555 | 76888;76889;76890 | chr2:178561765;178561764;178561763 | chr2:179426492;179426491;179426490 |
N2B | 19058 | 57397;57398;57399 | chr2:178561765;178561764;178561763 | chr2:179426492;179426491;179426490 |
Novex-1 | 19183 | 57772;57773;57774 | chr2:178561765;178561764;178561763 | chr2:179426492;179426491;179426490 |
Novex-2 | 19250 | 57973;57974;57975 | chr2:178561765;178561764;178561763 | chr2:179426492;179426491;179426490 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs1703752029 | None | 0.007 | N | 0.132 | 0.079 | 0.148003135375 | gnomAD-4.0.0 | 6.84307E-07 | None | None | None | None | N | None | 2.98846E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0739 | likely_benign | 0.0743 | benign | -0.912 | Destabilizing | 0.543 | D | 0.303 | neutral | None | None | None | None | N |
S/C | 0.0765 | likely_benign | 0.0775 | benign | -0.614 | Destabilizing | 0.994 | D | 0.411 | neutral | N | 0.461358869 | None | None | N |
S/D | 0.476 | ambiguous | 0.4274 | ambiguous | -0.3 | Destabilizing | 0.59 | D | 0.32 | neutral | None | None | None | None | N |
S/E | 0.4968 | ambiguous | 0.4448 | ambiguous | -0.284 | Destabilizing | 0.742 | D | 0.307 | neutral | None | None | None | None | N |
S/F | 0.1728 | likely_benign | 0.1745 | benign | -1.084 | Destabilizing | 0.953 | D | 0.467 | neutral | None | None | None | None | N |
S/G | 0.1042 | likely_benign | 0.1062 | benign | -1.173 | Destabilizing | 0.309 | N | 0.309 | neutral | N | 0.468188841 | None | None | N |
S/H | 0.321 | likely_benign | 0.2955 | benign | -1.582 | Destabilizing | 0.953 | D | 0.427 | neutral | None | None | None | None | N |
S/I | 0.1372 | likely_benign | 0.1418 | benign | -0.317 | Destabilizing | 0.028 | N | 0.275 | neutral | N | 0.520444458 | None | None | N |
S/K | 0.566 | likely_pathogenic | 0.4802 | ambiguous | -0.673 | Destabilizing | 0.037 | N | 0.124 | neutral | None | None | None | None | N |
S/L | 0.0787 | likely_benign | 0.0833 | benign | -0.317 | Destabilizing | 0.373 | N | 0.361 | neutral | None | None | None | None | N |
S/M | 0.1413 | likely_benign | 0.1457 | benign | -0.036 | Destabilizing | 0.953 | D | 0.428 | neutral | None | None | None | None | N |
S/N | 0.136 | likely_benign | 0.1259 | benign | -0.708 | Destabilizing | 0.007 | N | 0.132 | neutral | N | 0.440463522 | None | None | N |
S/P | 0.901 | likely_pathogenic | 0.8899 | pathogenic | -0.482 | Destabilizing | 0.984 | D | 0.453 | neutral | None | None | None | None | N |
S/Q | 0.432 | ambiguous | 0.3878 | ambiguous | -0.842 | Destabilizing | 0.91 | D | 0.413 | neutral | None | None | None | None | N |
S/R | 0.4932 | ambiguous | 0.4165 | ambiguous | -0.582 | Destabilizing | 0.521 | D | 0.459 | neutral | N | 0.44088481 | None | None | N |
S/T | 0.0754 | likely_benign | 0.077 | benign | -0.733 | Destabilizing | 0.012 | N | 0.056 | neutral | N | 0.373923525 | None | None | N |
S/V | 0.1347 | likely_benign | 0.139 | benign | -0.482 | Destabilizing | 0.373 | N | 0.354 | neutral | None | None | None | None | N |
S/W | 0.3286 | likely_benign | 0.3444 | ambiguous | -1.03 | Destabilizing | 0.996 | D | 0.524 | neutral | None | None | None | None | N |
S/Y | 0.1638 | likely_benign | 0.1645 | benign | -0.765 | Destabilizing | 0.984 | D | 0.474 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.