Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28135 | 84628;84629;84630 | chr2:178561729;178561728;178561727 | chr2:179426456;179426455;179426454 |
N2AB | 26494 | 79705;79706;79707 | chr2:178561729;178561728;178561727 | chr2:179426456;179426455;179426454 |
N2A | 25567 | 76924;76925;76926 | chr2:178561729;178561728;178561727 | chr2:179426456;179426455;179426454 |
N2B | 19070 | 57433;57434;57435 | chr2:178561729;178561728;178561727 | chr2:179426456;179426455;179426454 |
Novex-1 | 19195 | 57808;57809;57810 | chr2:178561729;178561728;178561727 | chr2:179426456;179426455;179426454 |
Novex-2 | 19262 | 58009;58010;58011 | chr2:178561729;178561728;178561727 | chr2:179426456;179426455;179426454 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.958 | N | 0.727 | 0.267 | 0.353974658523 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9467 | likely_pathogenic | 0.9487 | pathogenic | -0.687 | Destabilizing | 0.272 | N | 0.641 | neutral | None | None | None | None | I |
Y/C | 0.4987 | ambiguous | 0.5017 | ambiguous | 0.19 | Stabilizing | 0.958 | D | 0.727 | prob.delet. | N | 0.470532637 | None | None | I |
Y/D | 0.9413 | likely_pathogenic | 0.9361 | pathogenic | 0.758 | Stabilizing | 0.331 | N | 0.649 | neutral | N | 0.497622887 | None | None | I |
Y/E | 0.9805 | likely_pathogenic | 0.9786 | pathogenic | 0.738 | Stabilizing | 0.567 | D | 0.605 | neutral | None | None | None | None | I |
Y/F | 0.0965 | likely_benign | 0.1063 | benign | -0.363 | Destabilizing | 0.001 | N | 0.387 | neutral | N | 0.467532693 | None | None | I |
Y/G | 0.9303 | likely_pathogenic | 0.9365 | pathogenic | -0.88 | Destabilizing | 0.157 | N | 0.622 | neutral | None | None | None | None | I |
Y/H | 0.6579 | likely_pathogenic | 0.6312 | pathogenic | 0.182 | Stabilizing | 0.667 | D | 0.511 | neutral | N | 0.469923526 | None | None | I |
Y/I | 0.7801 | likely_pathogenic | 0.795 | pathogenic | -0.199 | Destabilizing | 0.396 | N | 0.581 | neutral | None | None | None | None | I |
Y/K | 0.9716 | likely_pathogenic | 0.9719 | pathogenic | 0.225 | Stabilizing | 0.567 | D | 0.615 | neutral | None | None | None | None | I |
Y/L | 0.7422 | likely_pathogenic | 0.7558 | pathogenic | -0.199 | Destabilizing | 0.157 | N | 0.607 | neutral | None | None | None | None | I |
Y/M | 0.876 | likely_pathogenic | 0.8864 | pathogenic | -0.059 | Destabilizing | 0.909 | D | 0.595 | neutral | None | None | None | None | I |
Y/N | 0.7743 | likely_pathogenic | 0.7759 | pathogenic | 0.05 | Stabilizing | 0.002 | N | 0.514 | neutral | N | 0.486355487 | None | None | I |
Y/P | 0.9922 | likely_pathogenic | 0.9919 | pathogenic | -0.342 | Destabilizing | 0.89 | D | 0.697 | prob.neutral | None | None | None | None | I |
Y/Q | 0.9549 | likely_pathogenic | 0.9555 | pathogenic | 0.077 | Stabilizing | 0.567 | D | 0.601 | neutral | None | None | None | None | I |
Y/R | 0.9309 | likely_pathogenic | 0.9366 | pathogenic | 0.488 | Stabilizing | 0.567 | D | 0.68 | prob.neutral | None | None | None | None | I |
Y/S | 0.8563 | likely_pathogenic | 0.8745 | pathogenic | -0.349 | Destabilizing | 0.124 | N | 0.61 | neutral | N | 0.46423876 | None | None | I |
Y/T | 0.9516 | likely_pathogenic | 0.9518 | pathogenic | -0.276 | Destabilizing | 0.567 | D | 0.597 | neutral | None | None | None | None | I |
Y/V | 0.7376 | likely_pathogenic | 0.7623 | pathogenic | -0.342 | Destabilizing | 0.157 | N | 0.605 | neutral | None | None | None | None | I |
Y/W | 0.6129 | likely_pathogenic | 0.5786 | pathogenic | -0.482 | Destabilizing | 0.909 | D | 0.509 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.