Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28137 | 84634;84635;84636 | chr2:178561723;178561722;178561721 | chr2:179426450;179426449;179426448 |
N2AB | 26496 | 79711;79712;79713 | chr2:178561723;178561722;178561721 | chr2:179426450;179426449;179426448 |
N2A | 25569 | 76930;76931;76932 | chr2:178561723;178561722;178561721 | chr2:179426450;179426449;179426448 |
N2B | 19072 | 57439;57440;57441 | chr2:178561723;178561722;178561721 | chr2:179426450;179426449;179426448 |
Novex-1 | 19197 | 57814;57815;57816 | chr2:178561723;178561722;178561721 | chr2:179426450;179426449;179426448 |
Novex-2 | 19264 | 58015;58016;58017 | chr2:178561723;178561722;178561721 | chr2:179426450;179426449;179426448 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.124 | N | 0.585 | 0.123 | 0.199424873507 | gnomAD-4.0.0 | 2.04055E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.23125E-05 | 0 | 0 |
K/M | None | None | 0.958 | N | 0.72 | 0.299 | 0.326616659874 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.488 | ambiguous | 0.4525 | ambiguous | -0.531 | Destabilizing | 0.272 | N | 0.609 | neutral | None | None | None | None | I |
K/C | 0.7086 | likely_pathogenic | 0.6366 | pathogenic | -0.529 | Destabilizing | 0.968 | D | 0.824 | deleterious | None | None | None | None | I |
K/D | 0.8278 | likely_pathogenic | 0.8073 | pathogenic | -0.058 | Destabilizing | 0.567 | D | 0.672 | neutral | None | None | None | None | I |
K/E | 0.2757 | likely_benign | 0.2722 | benign | 0.023 | Stabilizing | 0.124 | N | 0.585 | neutral | N | 0.482307358 | None | None | I |
K/F | 0.7852 | likely_pathogenic | 0.7407 | pathogenic | -0.342 | Destabilizing | 0.726 | D | 0.8 | deleterious | None | None | None | None | I |
K/G | 0.6887 | likely_pathogenic | 0.6256 | pathogenic | -0.862 | Destabilizing | 0.272 | N | 0.7 | prob.neutral | None | None | None | None | I |
K/H | 0.4344 | ambiguous | 0.3942 | ambiguous | -1.168 | Destabilizing | 0.006 | N | 0.473 | neutral | None | None | None | None | I |
K/I | 0.275 | likely_benign | 0.2688 | benign | 0.309 | Stabilizing | 0.726 | D | 0.802 | deleterious | None | None | None | None | I |
K/L | 0.3716 | ambiguous | 0.3437 | ambiguous | 0.309 | Stabilizing | 0.272 | N | 0.711 | prob.delet. | None | None | None | None | I |
K/M | 0.2418 | likely_benign | 0.2358 | benign | 0.261 | Stabilizing | 0.958 | D | 0.72 | prob.delet. | N | 0.500781262 | None | None | I |
K/N | 0.605 | likely_pathogenic | 0.574 | pathogenic | -0.305 | Destabilizing | 0.22 | N | 0.643 | neutral | N | 0.521673823 | None | None | I |
K/P | 0.7299 | likely_pathogenic | 0.6853 | pathogenic | 0.06 | Stabilizing | 0.726 | D | 0.723 | prob.delet. | None | None | None | None | I |
K/Q | 0.1629 | likely_benign | 0.1533 | benign | -0.445 | Destabilizing | 0.331 | N | 0.669 | neutral | N | 0.466801975 | None | None | I |
K/R | 0.0843 | likely_benign | 0.0801 | benign | -0.476 | Destabilizing | 0.001 | N | 0.225 | neutral | N | 0.451429877 | None | None | I |
K/S | 0.5941 | likely_pathogenic | 0.5519 | ambiguous | -0.977 | Destabilizing | 0.272 | N | 0.619 | neutral | None | None | None | None | I |
K/T | 0.2379 | likely_benign | 0.2268 | benign | -0.697 | Destabilizing | 0.497 | N | 0.655 | neutral | N | 0.454950185 | None | None | I |
K/V | 0.2812 | likely_benign | 0.2718 | benign | 0.06 | Stabilizing | 0.567 | D | 0.765 | deleterious | None | None | None | None | I |
K/W | 0.8179 | likely_pathogenic | 0.7707 | pathogenic | -0.192 | Destabilizing | 0.968 | D | 0.804 | deleterious | None | None | None | None | I |
K/Y | 0.6769 | likely_pathogenic | 0.6221 | pathogenic | 0.093 | Stabilizing | 0.396 | N | 0.785 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.