Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28160 | 84703;84704;84705 | chr2:178561654;178561653;178561652 | chr2:179426381;179426380;179426379 |
N2AB | 26519 | 79780;79781;79782 | chr2:178561654;178561653;178561652 | chr2:179426381;179426380;179426379 |
N2A | 25592 | 76999;77000;77001 | chr2:178561654;178561653;178561652 | chr2:179426381;179426380;179426379 |
N2B | 19095 | 57508;57509;57510 | chr2:178561654;178561653;178561652 | chr2:179426381;179426380;179426379 |
Novex-1 | 19220 | 57883;57884;57885 | chr2:178561654;178561653;178561652 | chr2:179426381;179426380;179426379 |
Novex-2 | 19287 | 58084;58085;58086 | chr2:178561654;178561653;178561652 | chr2:179426381;179426380;179426379 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.873 | N | 0.433 | 0.243 | 0.361558571881 | gnomAD-4.0.0 | 1.60568E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88472E-06 | 0 | 0 |
T/P | rs985003893 | None | 0.003 | N | 0.197 | 0.161 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/P | rs985003893 | None | 0.003 | N | 0.197 | 0.161 | None | gnomAD-4.0.0 | 1.18164E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.5299E-05 | 0 | 1.60865E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1476 | likely_benign | 0.1268 | benign | -0.744 | Destabilizing | 0.005 | N | 0.082 | neutral | N | 0.471245002 | None | None | I |
T/C | 0.5856 | likely_pathogenic | 0.5221 | ambiguous | -0.463 | Destabilizing | 0.991 | D | 0.381 | neutral | None | None | None | None | I |
T/D | 0.7364 | likely_pathogenic | 0.689 | pathogenic | -0.421 | Destabilizing | 0.39 | N | 0.361 | neutral | None | None | None | None | I |
T/E | 0.5454 | ambiguous | 0.5049 | ambiguous | -0.45 | Destabilizing | 0.561 | D | 0.343 | neutral | None | None | None | None | I |
T/F | 0.4033 | ambiguous | 0.334 | benign | -0.906 | Destabilizing | 0.965 | D | 0.381 | neutral | None | None | None | None | I |
T/G | 0.5786 | likely_pathogenic | 0.5175 | ambiguous | -0.968 | Destabilizing | 0.345 | N | 0.328 | neutral | None | None | None | None | I |
T/H | 0.4581 | ambiguous | 0.4002 | ambiguous | -1.284 | Destabilizing | 0.901 | D | 0.359 | neutral | None | None | None | None | I |
T/I | 0.1896 | likely_benign | 0.1609 | benign | -0.245 | Destabilizing | 0.873 | D | 0.433 | neutral | N | 0.471938436 | None | None | I |
T/K | 0.3394 | likely_benign | 0.296 | benign | -0.771 | Destabilizing | 0.017 | N | 0.183 | neutral | None | None | None | None | I |
T/L | 0.141 | likely_benign | 0.1163 | benign | -0.245 | Destabilizing | 0.561 | D | 0.342 | neutral | None | None | None | None | I |
T/M | 0.1075 | likely_benign | 0.0915 | benign | 0.135 | Stabilizing | 0.965 | D | 0.396 | neutral | None | None | None | None | I |
T/N | 0.2176 | likely_benign | 0.1856 | benign | -0.624 | Destabilizing | 0.013 | N | 0.256 | neutral | N | 0.431835678 | None | None | I |
T/P | 0.1661 | likely_benign | 0.1375 | benign | -0.38 | Destabilizing | 0.003 | N | 0.197 | neutral | N | 0.457835775 | None | None | I |
T/Q | 0.3395 | likely_benign | 0.3031 | benign | -0.885 | Destabilizing | 0.818 | D | 0.434 | neutral | None | None | None | None | I |
T/R | 0.3403 | ambiguous | 0.2859 | benign | -0.454 | Destabilizing | 0.39 | N | 0.412 | neutral | None | None | None | None | I |
T/S | 0.2157 | likely_benign | 0.1844 | benign | -0.862 | Destabilizing | 0.036 | N | 0.111 | neutral | N | 0.470957001 | None | None | I |
T/V | 0.1705 | likely_benign | 0.144 | benign | -0.38 | Destabilizing | 0.561 | D | 0.27 | neutral | None | None | None | None | I |
T/W | 0.8001 | likely_pathogenic | 0.756 | pathogenic | -0.822 | Destabilizing | 0.991 | D | 0.443 | neutral | None | None | None | None | I |
T/Y | 0.4363 | ambiguous | 0.3866 | ambiguous | -0.599 | Destabilizing | 0.965 | D | 0.381 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.