Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28163 | 84712;84713;84714 | chr2:178561645;178561644;178561643 | chr2:179426372;179426371;179426370 |
N2AB | 26522 | 79789;79790;79791 | chr2:178561645;178561644;178561643 | chr2:179426372;179426371;179426370 |
N2A | 25595 | 77008;77009;77010 | chr2:178561645;178561644;178561643 | chr2:179426372;179426371;179426370 |
N2B | 19098 | 57517;57518;57519 | chr2:178561645;178561644;178561643 | chr2:179426372;179426371;179426370 |
Novex-1 | 19223 | 57892;57893;57894 | chr2:178561645;178561644;178561643 | chr2:179426372;179426371;179426370 |
Novex-2 | 19290 | 58093;58094;58095 | chr2:178561645;178561644;178561643 | chr2:179426372;179426371;179426370 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | N | 0.621 | 0.396 | 0.628378350306 | gnomAD-4.0.0 | 3.20099E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.74749E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4049 | ambiguous | 0.3817 | ambiguous | -1.592 | Destabilizing | 0.999 | D | 0.621 | neutral | N | 0.50430157 | None | None | N |
V/C | 0.9393 | likely_pathogenic | 0.9313 | pathogenic | -0.945 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/D | 0.9783 | likely_pathogenic | 0.9717 | pathogenic | -1.641 | Destabilizing | 1.0 | D | 0.885 | deleterious | N | 0.508522936 | None | None | N |
V/E | 0.9581 | likely_pathogenic | 0.9463 | pathogenic | -1.567 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
V/F | 0.8225 | likely_pathogenic | 0.7814 | pathogenic | -1.079 | Destabilizing | 1.0 | D | 0.867 | deleterious | N | 0.487083637 | None | None | N |
V/G | 0.744 | likely_pathogenic | 0.7158 | pathogenic | -1.984 | Destabilizing | 1.0 | D | 0.869 | deleterious | N | 0.503888127 | None | None | N |
V/H | 0.9878 | likely_pathogenic | 0.9845 | pathogenic | -1.57 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
V/I | 0.1063 | likely_benign | 0.0989 | benign | -0.579 | Destabilizing | 0.997 | D | 0.599 | neutral | N | 0.45997479 | None | None | N |
V/K | 0.9769 | likely_pathogenic | 0.97 | pathogenic | -1.377 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
V/L | 0.6781 | likely_pathogenic | 0.5984 | pathogenic | -0.579 | Destabilizing | 0.997 | D | 0.615 | neutral | N | 0.52075389 | None | None | N |
V/M | 0.5809 | likely_pathogenic | 0.544 | ambiguous | -0.411 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
V/N | 0.9237 | likely_pathogenic | 0.9005 | pathogenic | -1.284 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
V/P | 0.7943 | likely_pathogenic | 0.7456 | pathogenic | -0.883 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
V/Q | 0.9628 | likely_pathogenic | 0.9531 | pathogenic | -1.346 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
V/R | 0.9612 | likely_pathogenic | 0.9493 | pathogenic | -0.953 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/S | 0.783 | likely_pathogenic | 0.7494 | pathogenic | -1.814 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
V/T | 0.512 | ambiguous | 0.4844 | ambiguous | -1.619 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | N |
V/W | 0.9928 | likely_pathogenic | 0.9903 | pathogenic | -1.4 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
V/Y | 0.9705 | likely_pathogenic | 0.9604 | pathogenic | -1.058 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.