Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28167 | 84724;84725;84726 | chr2:178561633;178561632;178561631 | chr2:179426360;179426359;179426358 |
N2AB | 26526 | 79801;79802;79803 | chr2:178561633;178561632;178561631 | chr2:179426360;179426359;179426358 |
N2A | 25599 | 77020;77021;77022 | chr2:178561633;178561632;178561631 | chr2:179426360;179426359;179426358 |
N2B | 19102 | 57529;57530;57531 | chr2:178561633;178561632;178561631 | chr2:179426360;179426359;179426358 |
Novex-1 | 19227 | 57904;57905;57906 | chr2:178561633;178561632;178561631 | chr2:179426360;179426359;179426358 |
Novex-2 | 19294 | 58105;58106;58107 | chr2:178561633;178561632;178561631 | chr2:179426360;179426359;179426358 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1159274489 | None | 0.983 | N | 0.681 | 0.473 | 0.55911886355 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs1159274489 | None | 0.983 | N | 0.681 | 0.473 | 0.55911886355 | gnomAD-4.0.0 | 6.57281E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46994E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1506 | likely_benign | 0.1398 | benign | -0.59 | Destabilizing | 0.63 | D | 0.455 | neutral | N | 0.479071921 | None | None | N |
T/C | 0.5841 | likely_pathogenic | 0.5462 | ambiguous | -0.335 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | N |
T/D | 0.4791 | ambiguous | 0.451 | ambiguous | -1.191 | Destabilizing | 0.975 | D | 0.634 | neutral | None | None | None | None | N |
T/E | 0.6057 | likely_pathogenic | 0.5622 | ambiguous | -1.175 | Destabilizing | 0.975 | D | 0.64 | neutral | None | None | None | None | N |
T/F | 0.6343 | likely_pathogenic | 0.5806 | pathogenic | -0.669 | Destabilizing | 0.987 | D | 0.706 | prob.neutral | None | None | None | None | N |
T/G | 0.2047 | likely_benign | 0.1969 | benign | -0.869 | Destabilizing | 0.845 | D | 0.551 | neutral | None | None | None | None | N |
T/H | 0.4755 | ambiguous | 0.4396 | ambiguous | -1.327 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
T/I | 0.7266 | likely_pathogenic | 0.6853 | pathogenic | 0.07 | Stabilizing | 0.983 | D | 0.681 | prob.neutral | N | 0.496962367 | None | None | N |
T/K | 0.4415 | ambiguous | 0.4082 | ambiguous | -0.854 | Destabilizing | 0.967 | D | 0.641 | neutral | N | 0.486224718 | None | None | N |
T/L | 0.2926 | likely_benign | 0.2544 | benign | 0.07 | Stabilizing | 0.916 | D | 0.578 | neutral | None | None | None | None | N |
T/M | 0.21 | likely_benign | 0.1874 | benign | 0.529 | Stabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
T/N | 0.1409 | likely_benign | 0.1324 | benign | -0.967 | Destabilizing | 0.975 | D | 0.627 | neutral | None | None | None | None | N |
T/P | 0.7427 | likely_pathogenic | 0.7289 | pathogenic | -0.117 | Destabilizing | 0.983 | D | 0.681 | prob.neutral | N | 0.519839562 | None | None | N |
T/Q | 0.3839 | ambiguous | 0.3548 | ambiguous | -1.139 | Destabilizing | 0.975 | D | 0.677 | prob.neutral | None | None | None | None | N |
T/R | 0.3986 | ambiguous | 0.3531 | ambiguous | -0.636 | Destabilizing | 0.967 | D | 0.686 | prob.neutral | N | 0.512481123 | None | None | N |
T/S | 0.0912 | likely_benign | 0.0881 | benign | -1.031 | Destabilizing | 0.099 | N | 0.23 | neutral | N | 0.434172268 | None | None | N |
T/V | 0.4673 | ambiguous | 0.4264 | ambiguous | -0.117 | Destabilizing | 0.916 | D | 0.537 | neutral | None | None | None | None | N |
T/W | 0.8784 | likely_pathogenic | 0.8472 | pathogenic | -0.739 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
T/Y | 0.6278 | likely_pathogenic | 0.5823 | pathogenic | -0.452 | Destabilizing | 0.996 | D | 0.709 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.