Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28169 | 84730;84731;84732 | chr2:178561627;178561626;178561625 | chr2:179426354;179426353;179426352 |
N2AB | 26528 | 79807;79808;79809 | chr2:178561627;178561626;178561625 | chr2:179426354;179426353;179426352 |
N2A | 25601 | 77026;77027;77028 | chr2:178561627;178561626;178561625 | chr2:179426354;179426353;179426352 |
N2B | 19104 | 57535;57536;57537 | chr2:178561627;178561626;178561625 | chr2:179426354;179426353;179426352 |
Novex-1 | 19229 | 57910;57911;57912 | chr2:178561627;178561626;178561625 | chr2:179426354;179426353;179426352 |
Novex-2 | 19296 | 58111;58112;58113 | chr2:178561627;178561626;178561625 | chr2:179426354;179426353;179426352 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.001 | N | 0.071 | 0.094 | 0.126345400529 | gnomAD-4.0.0 | 3.19103E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72928E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0765 | likely_benign | 0.0819 | benign | -0.71 | Destabilizing | 0.001 | N | 0.071 | neutral | N | 0.500474618 | None | None | N |
S/C | 0.1062 | likely_benign | 0.1134 | benign | -0.444 | Destabilizing | 0.987 | D | 0.358 | neutral | N | 0.476665611 | None | None | N |
S/D | 0.2695 | likely_benign | 0.2585 | benign | -0.272 | Destabilizing | 0.39 | N | 0.209 | neutral | None | None | None | None | N |
S/E | 0.3772 | ambiguous | 0.3777 | ambiguous | -0.345 | Destabilizing | 0.002 | N | 0.055 | neutral | None | None | None | None | N |
S/F | 0.1753 | likely_benign | 0.1863 | benign | -1.264 | Destabilizing | 0.326 | N | 0.407 | neutral | N | 0.483248977 | None | None | N |
S/G | 0.0896 | likely_benign | 0.0899 | benign | -0.843 | Destabilizing | 0.209 | N | 0.235 | neutral | None | None | None | None | N |
S/H | 0.2713 | likely_benign | 0.2645 | benign | -1.418 | Destabilizing | 0.818 | D | 0.365 | neutral | None | None | None | None | N |
S/I | 0.2223 | likely_benign | 0.2235 | benign | -0.474 | Destabilizing | 0.39 | N | 0.374 | neutral | None | None | None | None | N |
S/K | 0.5858 | likely_pathogenic | 0.5705 | pathogenic | -0.59 | Destabilizing | 0.39 | N | 0.21 | neutral | None | None | None | None | N |
S/L | 0.1088 | likely_benign | 0.1152 | benign | -0.474 | Destabilizing | 0.209 | N | 0.318 | neutral | None | None | None | None | N |
S/M | 0.1549 | likely_benign | 0.16 | benign | 0.029 | Stabilizing | 0.901 | D | 0.366 | neutral | None | None | None | None | N |
S/N | 0.0869 | likely_benign | 0.082 | benign | -0.39 | Destabilizing | 0.561 | D | 0.26 | neutral | None | None | None | None | N |
S/P | 0.7604 | likely_pathogenic | 0.8246 | pathogenic | -0.525 | Destabilizing | 0.662 | D | 0.435 | neutral | N | 0.482995487 | None | None | N |
S/Q | 0.3788 | ambiguous | 0.37 | ambiguous | -0.737 | Destabilizing | 0.39 | N | 0.328 | neutral | None | None | None | None | N |
S/R | 0.5605 | ambiguous | 0.5417 | ambiguous | -0.354 | Destabilizing | 0.561 | D | 0.433 | neutral | None | None | None | None | N |
S/T | 0.0762 | likely_benign | 0.0757 | benign | -0.499 | Destabilizing | 0.013 | N | 0.096 | neutral | N | 0.448346713 | None | None | N |
S/V | 0.1966 | likely_benign | 0.2046 | benign | -0.525 | Destabilizing | 0.004 | N | 0.267 | neutral | None | None | None | None | N |
S/W | 0.3195 | likely_benign | 0.3347 | benign | -1.185 | Destabilizing | 0.991 | D | 0.348 | neutral | None | None | None | None | N |
S/Y | 0.1349 | likely_benign | 0.1384 | benign | -0.928 | Destabilizing | 0.005 | N | 0.165 | neutral | N | 0.489430905 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.