Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28173 | 84742;84743;84744 | chr2:178561615;178561614;178561613 | chr2:179426342;179426341;179426340 |
N2AB | 26532 | 79819;79820;79821 | chr2:178561615;178561614;178561613 | chr2:179426342;179426341;179426340 |
N2A | 25605 | 77038;77039;77040 | chr2:178561615;178561614;178561613 | chr2:179426342;179426341;179426340 |
N2B | 19108 | 57547;57548;57549 | chr2:178561615;178561614;178561613 | chr2:179426342;179426341;179426340 |
Novex-1 | 19233 | 57922;57923;57924 | chr2:178561615;178561614;178561613 | chr2:179426342;179426341;179426340 |
Novex-2 | 19300 | 58123;58124;58125 | chr2:178561615;178561614;178561613 | chr2:179426342;179426341;179426340 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1559299770 | None | 0.999 | N | 0.636 | 0.503 | 0.623315389809 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | rs1703687594 | None | 0.997 | N | 0.543 | 0.308 | 0.442363741745 | gnomAD-4.0.0 | 1.36935E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79965E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8391 | likely_pathogenic | 0.8272 | pathogenic | -2.268 | Highly Destabilizing | 0.999 | D | 0.636 | neutral | N | 0.497808059 | None | None | N |
V/C | 0.9558 | likely_pathogenic | 0.9513 | pathogenic | -1.636 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
V/D | 0.9979 | likely_pathogenic | 0.9974 | pathogenic | -3.394 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
V/E | 0.9929 | likely_pathogenic | 0.9912 | pathogenic | -3.093 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | N | 0.521534628 | None | None | N |
V/F | 0.8474 | likely_pathogenic | 0.8248 | pathogenic | -1.38 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
V/G | 0.9337 | likely_pathogenic | 0.9305 | pathogenic | -2.836 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | N | 0.521534628 | None | None | N |
V/H | 0.9971 | likely_pathogenic | 0.9965 | pathogenic | -2.837 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
V/I | 0.0931 | likely_benign | 0.0904 | benign | -0.615 | Destabilizing | 0.997 | D | 0.543 | neutral | N | 0.453910035 | None | None | N |
V/K | 0.9941 | likely_pathogenic | 0.9931 | pathogenic | -1.99 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
V/L | 0.3654 | ambiguous | 0.3285 | benign | -0.615 | Destabilizing | 0.997 | D | 0.652 | neutral | N | 0.41947967 | None | None | N |
V/M | 0.6206 | likely_pathogenic | 0.5924 | pathogenic | -0.761 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
V/N | 0.9929 | likely_pathogenic | 0.991 | pathogenic | -2.64 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
V/P | 0.9891 | likely_pathogenic | 0.9881 | pathogenic | -1.149 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/Q | 0.9901 | likely_pathogenic | 0.9883 | pathogenic | -2.314 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
V/R | 0.9894 | likely_pathogenic | 0.9874 | pathogenic | -2.024 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
V/S | 0.9729 | likely_pathogenic | 0.9693 | pathogenic | -3.087 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
V/T | 0.9159 | likely_pathogenic | 0.9038 | pathogenic | -2.643 | Highly Destabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | N |
V/W | 0.9982 | likely_pathogenic | 0.9977 | pathogenic | -2.027 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
V/Y | 0.99 | likely_pathogenic | 0.9882 | pathogenic | -1.663 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.