Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28186 | 84781;84782;84783 | chr2:178561576;178561575;178561574 | chr2:179426303;179426302;179426301 |
N2AB | 26545 | 79858;79859;79860 | chr2:178561576;178561575;178561574 | chr2:179426303;179426302;179426301 |
N2A | 25618 | 77077;77078;77079 | chr2:178561576;178561575;178561574 | chr2:179426303;179426302;179426301 |
N2B | 19121 | 57586;57587;57588 | chr2:178561576;178561575;178561574 | chr2:179426303;179426302;179426301 |
Novex-1 | 19246 | 57961;57962;57963 | chr2:178561576;178561575;178561574 | chr2:179426303;179426302;179426301 |
Novex-2 | 19313 | 58162;58163;58164 | chr2:178561576;178561575;178561574 | chr2:179426303;179426302;179426301 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.369 | N | 0.511 | 0.146 | 0.476908202251 | gnomAD-4.0.0 | 1.59267E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41663E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9026 | likely_pathogenic | 0.8956 | pathogenic | -1.717 | Destabilizing | 0.892 | D | 0.595 | neutral | N | 0.497034364 | None | None | I |
V/C | 0.9558 | likely_pathogenic | 0.9608 | pathogenic | -1.205 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | I |
V/D | 0.9875 | likely_pathogenic | 0.991 | pathogenic | -1.463 | Destabilizing | 0.996 | D | 0.868 | deleterious | None | None | None | None | I |
V/E | 0.9677 | likely_pathogenic | 0.9709 | pathogenic | -1.406 | Destabilizing | 0.994 | D | 0.861 | deleterious | N | 0.504885177 | None | None | I |
V/F | 0.8945 | likely_pathogenic | 0.9007 | pathogenic | -1.204 | Destabilizing | 0.975 | D | 0.839 | deleterious | None | None | None | None | I |
V/G | 0.9128 | likely_pathogenic | 0.9253 | pathogenic | -2.101 | Highly Destabilizing | 0.983 | D | 0.847 | deleterious | N | 0.516152577 | None | None | I |
V/H | 0.991 | likely_pathogenic | 0.9936 | pathogenic | -1.552 | Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | I |
V/I | 0.0762 | likely_benign | 0.0778 | benign | -0.735 | Destabilizing | 0.025 | N | 0.261 | neutral | N | 0.38444995 | None | None | I |
V/K | 0.98 | likely_pathogenic | 0.9821 | pathogenic | -1.434 | Destabilizing | 0.987 | D | 0.86 | deleterious | None | None | None | None | I |
V/L | 0.579 | likely_pathogenic | 0.613 | pathogenic | -0.735 | Destabilizing | 0.369 | N | 0.511 | neutral | N | 0.514382491 | None | None | I |
V/M | 0.6825 | likely_pathogenic | 0.6988 | pathogenic | -0.572 | Destabilizing | 0.975 | D | 0.773 | deleterious | None | None | None | None | I |
V/N | 0.927 | likely_pathogenic | 0.9599 | pathogenic | -1.341 | Destabilizing | 0.996 | D | 0.861 | deleterious | None | None | None | None | I |
V/P | 0.8705 | likely_pathogenic | 0.8428 | pathogenic | -1.028 | Destabilizing | 0.996 | D | 0.873 | deleterious | None | None | None | None | I |
V/Q | 0.9761 | likely_pathogenic | 0.9783 | pathogenic | -1.43 | Destabilizing | 0.996 | D | 0.864 | deleterious | None | None | None | None | I |
V/R | 0.9738 | likely_pathogenic | 0.9765 | pathogenic | -0.941 | Destabilizing | 0.996 | D | 0.859 | deleterious | None | None | None | None | I |
V/S | 0.9469 | likely_pathogenic | 0.9532 | pathogenic | -1.958 | Destabilizing | 0.987 | D | 0.857 | deleterious | None | None | None | None | I |
V/T | 0.8812 | likely_pathogenic | 0.8823 | pathogenic | -1.776 | Destabilizing | 0.916 | D | 0.747 | deleterious | None | None | None | None | I |
V/W | 0.9964 | likely_pathogenic | 0.9968 | pathogenic | -1.44 | Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | I |
V/Y | 0.9819 | likely_pathogenic | 0.9851 | pathogenic | -1.139 | Destabilizing | 0.987 | D | 0.838 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.