Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28189 | 84790;84791;84792 | chr2:178561567;178561566;178561565 | chr2:179426294;179426293;179426292 |
N2AB | 26548 | 79867;79868;79869 | chr2:178561567;178561566;178561565 | chr2:179426294;179426293;179426292 |
N2A | 25621 | 77086;77087;77088 | chr2:178561567;178561566;178561565 | chr2:179426294;179426293;179426292 |
N2B | 19124 | 57595;57596;57597 | chr2:178561567;178561566;178561565 | chr2:179426294;179426293;179426292 |
Novex-1 | 19249 | 57970;57971;57972 | chr2:178561567;178561566;178561565 | chr2:179426294;179426293;179426292 |
Novex-2 | 19316 | 58171;58172;58173 | chr2:178561567;178561566;178561565 | chr2:179426294;179426293;179426292 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1489877895 | -1.355 | 1.0 | D | 0.887 | 0.841 | 0.875450778385 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
Y/C | rs1489877895 | -1.355 | 1.0 | D | 0.887 | 0.841 | 0.875450778385 | gnomAD-4.0.0 | 3.18518E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72027E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9985 | likely_pathogenic | 0.9982 | pathogenic | -3.806 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
Y/C | 0.9253 | likely_pathogenic | 0.9064 | pathogenic | -2.141 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.653048353 | None | None | N |
Y/D | 0.9987 | likely_pathogenic | 0.9986 | pathogenic | -3.979 | Highly Destabilizing | 1.0 | D | 0.923 | deleterious | D | 0.653250157 | None | None | N |
Y/E | 0.9996 | likely_pathogenic | 0.9995 | pathogenic | -3.78 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
Y/F | 0.2054 | likely_benign | 0.1823 | benign | -1.689 | Destabilizing | 0.999 | D | 0.649 | neutral | D | 0.557680478 | None | None | N |
Y/G | 0.9939 | likely_pathogenic | 0.9935 | pathogenic | -4.172 | Highly Destabilizing | 1.0 | D | 0.927 | deleterious | None | None | None | None | N |
Y/H | 0.9821 | likely_pathogenic | 0.9756 | pathogenic | -2.786 | Highly Destabilizing | 1.0 | D | 0.801 | deleterious | D | 0.652644744 | None | None | N |
Y/I | 0.9861 | likely_pathogenic | 0.9823 | pathogenic | -2.542 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Y/K | 0.9992 | likely_pathogenic | 0.9989 | pathogenic | -2.783 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
Y/L | 0.9721 | likely_pathogenic | 0.9684 | pathogenic | -2.542 | Highly Destabilizing | 0.999 | D | 0.776 | deleterious | None | None | None | None | N |
Y/M | 0.9905 | likely_pathogenic | 0.9874 | pathogenic | -2.177 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
Y/N | 0.9861 | likely_pathogenic | 0.9823 | pathogenic | -3.512 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | D | 0.653048353 | None | None | N |
Y/P | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -2.984 | Highly Destabilizing | 1.0 | D | 0.939 | deleterious | None | None | None | None | N |
Y/Q | 0.9989 | likely_pathogenic | 0.9984 | pathogenic | -3.287 | Highly Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
Y/R | 0.9965 | likely_pathogenic | 0.9954 | pathogenic | -2.444 | Highly Destabilizing | 1.0 | D | 0.914 | deleterious | None | None | None | None | N |
Y/S | 0.9931 | likely_pathogenic | 0.9912 | pathogenic | -3.808 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | D | 0.653048353 | None | None | N |
Y/T | 0.9981 | likely_pathogenic | 0.9974 | pathogenic | -3.507 | Highly Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | None | None | N |
Y/V | 0.9806 | likely_pathogenic | 0.9757 | pathogenic | -2.984 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
Y/W | 0.8419 | likely_pathogenic | 0.828 | pathogenic | -0.92 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.