Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28202 | 84829;84830;84831 | chr2:178561528;178561527;178561526 | chr2:179426255;179426254;179426253 |
N2AB | 26561 | 79906;79907;79908 | chr2:178561528;178561527;178561526 | chr2:179426255;179426254;179426253 |
N2A | 25634 | 77125;77126;77127 | chr2:178561528;178561527;178561526 | chr2:179426255;179426254;179426253 |
N2B | 19137 | 57634;57635;57636 | chr2:178561528;178561527;178561526 | chr2:179426255;179426254;179426253 |
Novex-1 | 19262 | 58009;58010;58011 | chr2:178561528;178561527;178561526 | chr2:179426255;179426254;179426253 |
Novex-2 | 19329 | 58210;58211;58212 | chr2:178561528;178561527;178561526 | chr2:179426255;179426254;179426253 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.301 | N | 0.329 | 0.142 | 0.152612264143 | gnomAD-4.0.0 | 1.5923E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02535E-05 |
S/T | rs747544266 | -0.057 | None | N | 0.125 | 0.123 | 0.0551355673512 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.66E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0796 | likely_benign | 0.079 | benign | -0.492 | Destabilizing | None | N | 0.126 | neutral | N | 0.43892194 | None | None | I |
S/C | 0.0782 | likely_benign | 0.0791 | benign | -0.355 | Destabilizing | 0.667 | D | 0.355 | neutral | None | None | None | None | I |
S/D | 0.4703 | ambiguous | 0.4714 | ambiguous | 0.489 | Stabilizing | 0.22 | N | 0.267 | neutral | None | None | None | None | I |
S/E | 0.4565 | ambiguous | 0.4501 | ambiguous | 0.482 | Stabilizing | 0.104 | N | 0.259 | neutral | None | None | None | None | I |
S/F | 0.1951 | likely_benign | 0.1929 | benign | -0.731 | Destabilizing | 0.497 | N | 0.423 | neutral | None | None | None | None | I |
S/G | 0.0978 | likely_benign | 0.0954 | benign | -0.712 | Destabilizing | 0.055 | N | 0.27 | neutral | None | None | None | None | I |
S/H | 0.2299 | likely_benign | 0.224 | benign | -0.981 | Destabilizing | 0.001 | N | 0.249 | neutral | None | None | None | None | I |
S/I | 0.1294 | likely_benign | 0.1229 | benign | -0.021 | Destabilizing | 0.055 | N | 0.331 | neutral | None | None | None | None | I |
S/K | 0.4735 | ambiguous | 0.4404 | ambiguous | -0.322 | Destabilizing | 0.104 | N | 0.272 | neutral | None | None | None | None | I |
S/L | 0.085 | likely_benign | 0.0836 | benign | -0.021 | Destabilizing | 0.042 | N | 0.317 | neutral | N | 0.434652271 | None | None | I |
S/M | 0.1223 | likely_benign | 0.1237 | benign | -0.067 | Destabilizing | 0.667 | D | 0.359 | neutral | None | None | None | None | I |
S/N | 0.0921 | likely_benign | 0.0919 | benign | -0.286 | Destabilizing | 0.22 | N | 0.281 | neutral | None | None | None | None | I |
S/P | 0.8525 | likely_pathogenic | 0.8462 | pathogenic | -0.145 | Destabilizing | 0.301 | N | 0.329 | neutral | N | 0.489292045 | None | None | I |
S/Q | 0.3173 | likely_benign | 0.3024 | benign | -0.365 | Destabilizing | 0.364 | N | 0.321 | neutral | None | None | None | None | I |
S/R | 0.4374 | ambiguous | 0.3962 | ambiguous | -0.222 | Destabilizing | 0.22 | N | 0.347 | neutral | None | None | None | None | I |
S/T | 0.0623 | likely_benign | 0.0617 | benign | -0.365 | Destabilizing | None | N | 0.125 | neutral | N | 0.33876052 | None | None | I |
S/V | 0.1205 | likely_benign | 0.1152 | benign | -0.145 | Destabilizing | None | N | 0.209 | neutral | None | None | None | None | I |
S/W | 0.3415 | ambiguous | 0.3311 | benign | -0.745 | Destabilizing | 0.958 | D | 0.408 | neutral | None | None | None | None | I |
S/Y | 0.1644 | likely_benign | 0.1595 | benign | -0.44 | Destabilizing | 0.22 | N | 0.421 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.