Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2820284829;84830;84831 chr2:178561528;178561527;178561526chr2:179426255;179426254;179426253
N2AB2656179906;79907;79908 chr2:178561528;178561527;178561526chr2:179426255;179426254;179426253
N2A2563477125;77126;77127 chr2:178561528;178561527;178561526chr2:179426255;179426254;179426253
N2B1913757634;57635;57636 chr2:178561528;178561527;178561526chr2:179426255;179426254;179426253
Novex-11926258009;58010;58011 chr2:178561528;178561527;178561526chr2:179426255;179426254;179426253
Novex-21932958210;58211;58212 chr2:178561528;178561527;178561526chr2:179426255;179426254;179426253
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: S
  • RefSeq wild type transcript codon: TCA
  • RefSeq wild type template codon: AGT
  • Domain: Fn3-93
  • Domain position: 49
  • Structural Position: 66
  • Q(SASA): 0.2212
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
S/P None None 0.301 N 0.329 0.142 0.152612264143 gnomAD-4.0.0 1.5923E-06 None None None None I None 0 0 None 0 0 None 0 0 0 0 3.02535E-05
S/T rs747544266 -0.057 None N 0.125 0.123 0.0551355673512 gnomAD-2.1.1 4.03E-06 None None None None I None 0 0 None 0 0 None 0 None 4.66E-05 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
S/A 0.0796 likely_benign 0.079 benign -0.492 Destabilizing None N 0.126 neutral N 0.43892194 None None I
S/C 0.0782 likely_benign 0.0791 benign -0.355 Destabilizing 0.667 D 0.355 neutral None None None None I
S/D 0.4703 ambiguous 0.4714 ambiguous 0.489 Stabilizing 0.22 N 0.267 neutral None None None None I
S/E 0.4565 ambiguous 0.4501 ambiguous 0.482 Stabilizing 0.104 N 0.259 neutral None None None None I
S/F 0.1951 likely_benign 0.1929 benign -0.731 Destabilizing 0.497 N 0.423 neutral None None None None I
S/G 0.0978 likely_benign 0.0954 benign -0.712 Destabilizing 0.055 N 0.27 neutral None None None None I
S/H 0.2299 likely_benign 0.224 benign -0.981 Destabilizing 0.001 N 0.249 neutral None None None None I
S/I 0.1294 likely_benign 0.1229 benign -0.021 Destabilizing 0.055 N 0.331 neutral None None None None I
S/K 0.4735 ambiguous 0.4404 ambiguous -0.322 Destabilizing 0.104 N 0.272 neutral None None None None I
S/L 0.085 likely_benign 0.0836 benign -0.021 Destabilizing 0.042 N 0.317 neutral N 0.434652271 None None I
S/M 0.1223 likely_benign 0.1237 benign -0.067 Destabilizing 0.667 D 0.359 neutral None None None None I
S/N 0.0921 likely_benign 0.0919 benign -0.286 Destabilizing 0.22 N 0.281 neutral None None None None I
S/P 0.8525 likely_pathogenic 0.8462 pathogenic -0.145 Destabilizing 0.301 N 0.329 neutral N 0.489292045 None None I
S/Q 0.3173 likely_benign 0.3024 benign -0.365 Destabilizing 0.364 N 0.321 neutral None None None None I
S/R 0.4374 ambiguous 0.3962 ambiguous -0.222 Destabilizing 0.22 N 0.347 neutral None None None None I
S/T 0.0623 likely_benign 0.0617 benign -0.365 Destabilizing None N 0.125 neutral N 0.33876052 None None I
S/V 0.1205 likely_benign 0.1152 benign -0.145 Destabilizing None N 0.209 neutral None None None None I
S/W 0.3415 ambiguous 0.3311 benign -0.745 Destabilizing 0.958 D 0.408 neutral None None None None I
S/Y 0.1644 likely_benign 0.1595 benign -0.44 Destabilizing 0.22 N 0.421 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.