Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28205 | 84838;84839;84840 | chr2:178561519;178561518;178561517 | chr2:179426246;179426245;179426244 |
N2AB | 26564 | 79915;79916;79917 | chr2:178561519;178561518;178561517 | chr2:179426246;179426245;179426244 |
N2A | 25637 | 77134;77135;77136 | chr2:178561519;178561518;178561517 | chr2:179426246;179426245;179426244 |
N2B | 19140 | 57643;57644;57645 | chr2:178561519;178561518;178561517 | chr2:179426246;179426245;179426244 |
Novex-1 | 19265 | 58018;58019;58020 | chr2:178561519;178561518;178561517 | chr2:179426246;179426245;179426244 |
Novex-2 | 19332 | 58219;58220;58221 | chr2:178561519;178561518;178561517 | chr2:179426246;179426245;179426244 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.999 | N | 0.599 | 0.357 | 0.193865811164 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.8072 | likely_pathogenic | 0.7801 | pathogenic | -0.725 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
N/C | 0.6261 | likely_pathogenic | 0.6353 | pathogenic | 0.085 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
N/D | 0.7567 | likely_pathogenic | 0.7145 | pathogenic | -0.881 | Destabilizing | 0.999 | D | 0.636 | neutral | N | 0.49988152 | None | None | N |
N/E | 0.9684 | likely_pathogenic | 0.9625 | pathogenic | -0.741 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
N/F | 0.9928 | likely_pathogenic | 0.9914 | pathogenic | -0.259 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
N/G | 0.6158 | likely_pathogenic | 0.5793 | pathogenic | -1.108 | Destabilizing | 0.999 | D | 0.596 | neutral | None | None | None | None | N |
N/H | 0.7 | likely_pathogenic | 0.7067 | pathogenic | -1.004 | Destabilizing | 1.0 | D | 0.752 | deleterious | N | 0.484690554 | None | None | N |
N/I | 0.9456 | likely_pathogenic | 0.9378 | pathogenic | 0.273 | Stabilizing | 1.0 | D | 0.803 | deleterious | N | 0.502603772 | None | None | N |
N/K | 0.9793 | likely_pathogenic | 0.9769 | pathogenic | -0.563 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | N | 0.497323853 | None | None | N |
N/L | 0.9224 | likely_pathogenic | 0.9148 | pathogenic | 0.273 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
N/M | 0.9433 | likely_pathogenic | 0.9331 | pathogenic | 0.636 | Stabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
N/P | 0.9534 | likely_pathogenic | 0.957 | pathogenic | -0.03 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
N/Q | 0.9377 | likely_pathogenic | 0.9296 | pathogenic | -0.91 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
N/R | 0.9661 | likely_pathogenic | 0.9622 | pathogenic | -0.821 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
N/S | 0.1246 | likely_benign | 0.1148 | benign | -1.071 | Destabilizing | 0.999 | D | 0.599 | neutral | N | 0.478419449 | None | None | N |
N/T | 0.4187 | ambiguous | 0.4105 | ambiguous | -0.751 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | N | 0.468277685 | None | None | N |
N/V | 0.8716 | likely_pathogenic | 0.8584 | pathogenic | -0.03 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
N/W | 0.9962 | likely_pathogenic | 0.996 | pathogenic | -0.159 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
N/Y | 0.9427 | likely_pathogenic | 0.9365 | pathogenic | 0.074 | Stabilizing | 1.0 | D | 0.79 | deleterious | N | 0.484628102 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.