Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28207 | 84844;84845;84846 | chr2:178561513;178561512;178561511 | chr2:179426240;179426239;179426238 |
N2AB | 26566 | 79921;79922;79923 | chr2:178561513;178561512;178561511 | chr2:179426240;179426239;179426238 |
N2A | 25639 | 77140;77141;77142 | chr2:178561513;178561512;178561511 | chr2:179426240;179426239;179426238 |
N2B | 19142 | 57649;57650;57651 | chr2:178561513;178561512;178561511 | chr2:179426240;179426239;179426238 |
Novex-1 | 19267 | 58024;58025;58026 | chr2:178561513;178561512;178561511 | chr2:179426240;179426239;179426238 |
Novex-2 | 19334 | 58225;58226;58227 | chr2:178561513;178561512;178561511 | chr2:179426240;179426239;179426238 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.017 | N | 0.371 | 0.07 | 0.264547087235 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1236 | likely_benign | 0.1164 | benign | -0.483 | Destabilizing | 0.002 | N | 0.225 | neutral | None | None | None | None | I |
I/C | 0.293 | likely_benign | 0.2835 | benign | -0.74 | Destabilizing | 0.245 | N | 0.197 | neutral | None | None | None | None | I |
I/D | 0.4018 | ambiguous | 0.4043 | ambiguous | -0.262 | Destabilizing | 0.044 | N | 0.351 | neutral | None | None | None | None | I |
I/E | 0.3771 | ambiguous | 0.3753 | ambiguous | -0.348 | Destabilizing | 0.018 | N | 0.325 | neutral | None | None | None | None | I |
I/F | 0.0944 | likely_benign | 0.0957 | benign | -0.608 | Destabilizing | 0.017 | N | 0.198 | neutral | N | 0.466452471 | None | None | I |
I/G | 0.2425 | likely_benign | 0.2174 | benign | -0.592 | Destabilizing | None | N | 0.148 | neutral | None | None | None | None | I |
I/H | 0.2167 | likely_benign | 0.2259 | benign | 0.107 | Stabilizing | 0.245 | N | 0.243 | neutral | None | None | None | None | I |
I/K | 0.254 | likely_benign | 0.2583 | benign | -0.334 | Destabilizing | 0.009 | N | 0.3 | neutral | None | None | None | None | I |
I/L | 0.0718 | likely_benign | 0.069 | benign | -0.313 | Destabilizing | None | N | 0.111 | neutral | N | 0.431953108 | None | None | I |
I/M | 0.0604 | likely_benign | 0.0559 | benign | -0.607 | Destabilizing | None | N | 0.179 | neutral | N | 0.445501196 | None | None | I |
I/N | 0.0846 | likely_benign | 0.0853 | benign | -0.21 | Destabilizing | 0.017 | N | 0.371 | neutral | N | 0.441114096 | None | None | I |
I/P | 0.573 | likely_pathogenic | 0.558 | ambiguous | -0.341 | Destabilizing | 0.085 | N | 0.385 | neutral | None | None | None | None | I |
I/Q | 0.2131 | likely_benign | 0.2061 | benign | -0.387 | Destabilizing | 0.044 | N | 0.383 | neutral | None | None | None | None | I |
I/R | 0.2002 | likely_benign | 0.2134 | benign | 0.144 | Stabilizing | 0.044 | N | 0.393 | neutral | None | None | None | None | I |
I/S | 0.088 | likely_benign | 0.0861 | benign | -0.588 | Destabilizing | None | N | 0.111 | neutral | N | 0.412658059 | None | None | I |
I/T | 0.0822 | likely_benign | 0.0854 | benign | -0.574 | Destabilizing | None | N | 0.105 | neutral | N | 0.366442979 | None | None | I |
I/V | 0.0662 | likely_benign | 0.0646 | benign | -0.341 | Destabilizing | None | N | 0.113 | neutral | N | 0.433318545 | None | None | I |
I/W | 0.5544 | ambiguous | 0.5157 | ambiguous | -0.629 | Destabilizing | 0.788 | D | 0.235 | neutral | None | None | None | None | I |
I/Y | 0.2296 | likely_benign | 0.2299 | benign | -0.396 | Destabilizing | 0.085 | N | 0.325 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.