Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28216 | 84871;84872;84873 | chr2:178561486;178561485;178561484 | chr2:179426213;179426212;179426211 |
N2AB | 26575 | 79948;79949;79950 | chr2:178561486;178561485;178561484 | chr2:179426213;179426212;179426211 |
N2A | 25648 | 77167;77168;77169 | chr2:178561486;178561485;178561484 | chr2:179426213;179426212;179426211 |
N2B | 19151 | 57676;57677;57678 | chr2:178561486;178561485;178561484 | chr2:179426213;179426212;179426211 |
Novex-1 | 19276 | 58051;58052;58053 | chr2:178561486;178561485;178561484 | chr2:179426213;179426212;179426211 |
Novex-2 | 19343 | 58252;58253;58254 | chr2:178561486;178561485;178561484 | chr2:179426213;179426212;179426211 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.989 | N | 0.661 | 0.374 | 0.628255493996 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4493 | ambiguous | 0.4646 | ambiguous | -1.915 | Destabilizing | 0.989 | D | 0.661 | neutral | N | 0.489761766 | None | None | N |
V/C | 0.8529 | likely_pathogenic | 0.8627 | pathogenic | -1.438 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
V/D | 0.9374 | likely_pathogenic | 0.9389 | pathogenic | -2.088 | Highly Destabilizing | 0.999 | D | 0.821 | deleterious | N | 0.490672171 | None | None | N |
V/E | 0.8823 | likely_pathogenic | 0.8824 | pathogenic | -1.909 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
V/F | 0.3864 | ambiguous | 0.3931 | ambiguous | -1.186 | Destabilizing | 0.997 | D | 0.733 | prob.delet. | N | 0.490263642 | None | None | N |
V/G | 0.6755 | likely_pathogenic | 0.6845 | pathogenic | -2.42 | Highly Destabilizing | 0.998 | D | 0.823 | deleterious | N | 0.51217024 | None | None | N |
V/H | 0.9456 | likely_pathogenic | 0.9478 | pathogenic | -2.035 | Highly Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
V/I | 0.0875 | likely_benign | 0.0864 | benign | -0.537 | Destabilizing | 0.948 | D | 0.567 | neutral | N | 0.47444281 | None | None | N |
V/K | 0.9262 | likely_pathogenic | 0.9243 | pathogenic | -1.609 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
V/L | 0.3541 | ambiguous | 0.3637 | ambiguous | -0.537 | Destabilizing | 0.948 | D | 0.467 | neutral | N | 0.500335758 | None | None | N |
V/M | 0.3444 | ambiguous | 0.3421 | ambiguous | -0.524 | Destabilizing | 0.914 | D | 0.372 | neutral | None | None | None | None | N |
V/N | 0.8527 | likely_pathogenic | 0.8503 | pathogenic | -1.765 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
V/P | 0.9576 | likely_pathogenic | 0.961 | pathogenic | -0.966 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
V/Q | 0.8791 | likely_pathogenic | 0.879 | pathogenic | -1.668 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
V/R | 0.8997 | likely_pathogenic | 0.9009 | pathogenic | -1.386 | Destabilizing | 0.999 | D | 0.822 | deleterious | None | None | None | None | N |
V/S | 0.7026 | likely_pathogenic | 0.7074 | pathogenic | -2.41 | Highly Destabilizing | 0.999 | D | 0.784 | deleterious | None | None | None | None | N |
V/T | 0.5838 | likely_pathogenic | 0.5754 | pathogenic | -2.078 | Highly Destabilizing | 0.996 | D | 0.631 | neutral | None | None | None | None | N |
V/W | 0.9666 | likely_pathogenic | 0.9704 | pathogenic | -1.573 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
V/Y | 0.85 | likely_pathogenic | 0.8576 | pathogenic | -1.204 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.