Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2822 | 8689;8690;8691 | chr2:178770237;178770236;178770235 | chr2:179634964;179634963;179634962 |
N2AB | 2822 | 8689;8690;8691 | chr2:178770237;178770236;178770235 | chr2:179634964;179634963;179634962 |
N2A | 2822 | 8689;8690;8691 | chr2:178770237;178770236;178770235 | chr2:179634964;179634963;179634962 |
N2B | 2776 | 8551;8552;8553 | chr2:178770237;178770236;178770235 | chr2:179634964;179634963;179634962 |
Novex-1 | 2776 | 8551;8552;8553 | chr2:178770237;178770236;178770235 | chr2:179634964;179634963;179634962 |
Novex-2 | 2776 | 8551;8552;8553 | chr2:178770237;178770236;178770235 | chr2:179634964;179634963;179634962 |
Novex-3 | 2822 | 8689;8690;8691 | chr2:178770237;178770236;178770235 | chr2:179634964;179634963;179634962 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.996 | N | 0.395 | 0.452 | 0.583209036909 | gnomAD-4.0.0 | 1.36814E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99294E-07 | 0 | 1.65574E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0978 | likely_benign | 0.0902 | benign | -0.173 | Destabilizing | 0.826 | D | 0.339 | neutral | N | 0.49424768 | None | None | I |
T/C | 0.648 | likely_pathogenic | 0.6283 | pathogenic | -0.226 | Destabilizing | 0.999 | D | 0.395 | neutral | None | None | None | None | I |
T/D | 0.363 | ambiguous | 0.3583 | ambiguous | -0.072 | Destabilizing | 0.02 | N | 0.18 | neutral | None | None | None | None | I |
T/E | 0.427 | ambiguous | 0.3842 | ambiguous | -0.157 | Destabilizing | 0.759 | D | 0.351 | neutral | None | None | None | None | I |
T/F | 0.431 | ambiguous | 0.4183 | ambiguous | -0.729 | Destabilizing | 0.997 | D | 0.423 | neutral | None | None | None | None | I |
T/G | 0.2573 | likely_benign | 0.2728 | benign | -0.27 | Destabilizing | 0.02 | N | 0.199 | neutral | None | None | None | None | I |
T/H | 0.3226 | likely_benign | 0.306 | benign | -0.439 | Destabilizing | 0.991 | D | 0.417 | neutral | None | None | None | None | I |
T/I | 0.3769 | ambiguous | 0.3336 | benign | -0.037 | Destabilizing | 0.996 | D | 0.395 | neutral | N | 0.510904279 | None | None | I |
T/K | 0.3287 | likely_benign | 0.2875 | benign | -0.327 | Destabilizing | 0.939 | D | 0.365 | neutral | None | None | None | None | I |
T/L | 0.1751 | likely_benign | 0.172 | benign | -0.037 | Destabilizing | 0.969 | D | 0.38 | neutral | None | None | None | None | I |
T/M | 0.1276 | likely_benign | 0.1157 | benign | -0.055 | Destabilizing | 0.999 | D | 0.369 | neutral | None | None | None | None | I |
T/N | 0.121 | likely_benign | 0.1242 | benign | -0.036 | Destabilizing | 0.134 | N | 0.206 | neutral | N | 0.432452167 | None | None | I |
T/P | 0.3829 | ambiguous | 0.3436 | ambiguous | -0.056 | Destabilizing | 0.996 | D | 0.377 | neutral | N | 0.40827485 | None | None | I |
T/Q | 0.3435 | ambiguous | 0.3107 | benign | -0.27 | Destabilizing | 0.991 | D | 0.392 | neutral | None | None | None | None | I |
T/R | 0.2873 | likely_benign | 0.2349 | benign | 0.009 | Stabilizing | 0.991 | D | 0.382 | neutral | None | None | None | None | I |
T/S | 0.1149 | likely_benign | 0.1141 | benign | -0.189 | Destabilizing | 0.826 | D | 0.363 | neutral | N | 0.48486702 | None | None | I |
T/V | 0.2596 | likely_benign | 0.2365 | benign | -0.056 | Destabilizing | 0.99 | D | 0.291 | neutral | None | None | None | None | I |
T/W | 0.806 | likely_pathogenic | 0.7784 | pathogenic | -0.802 | Destabilizing | 0.999 | D | 0.477 | neutral | None | None | None | None | I |
T/Y | 0.4898 | ambiguous | 0.4602 | ambiguous | -0.498 | Destabilizing | 0.997 | D | 0.424 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.