Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28221 | 84886;84887;84888 | chr2:178561471;178561470;178561469 | chr2:179426198;179426197;179426196 |
N2AB | 26580 | 79963;79964;79965 | chr2:178561471;178561470;178561469 | chr2:179426198;179426197;179426196 |
N2A | 25653 | 77182;77183;77184 | chr2:178561471;178561470;178561469 | chr2:179426198;179426197;179426196 |
N2B | 19156 | 57691;57692;57693 | chr2:178561471;178561470;178561469 | chr2:179426198;179426197;179426196 |
Novex-1 | 19281 | 58066;58067;58068 | chr2:178561471;178561470;178561469 | chr2:179426198;179426197;179426196 |
Novex-2 | 19348 | 58267;58268;58269 | chr2:178561471;178561470;178561469 | chr2:179426198;179426197;179426196 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.892 | N | 0.438 | 0.44 | 0.42886291518 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/K | rs1309034017 | 0.146 | 0.805 | N | 0.521 | 0.308 | 0.346315397577 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14732E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1309034017 | 0.146 | 0.805 | N | 0.521 | 0.308 | 0.346315397577 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1309034017 | 0.146 | 0.805 | N | 0.521 | 0.308 | 0.346315397577 | gnomAD-4.0.0 | 6.57099E-06 | None | None | None | None | N | None | 2.41196E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3075 | likely_benign | 0.3585 | ambiguous | -0.576 | Destabilizing | 0.892 | D | 0.421 | neutral | N | 0.480786079 | None | None | N |
E/C | 0.956 | likely_pathogenic | 0.9659 | pathogenic | -0.069 | Destabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | N |
E/D | 0.3414 | ambiguous | 0.4079 | ambiguous | -0.59 | Destabilizing | 0.892 | D | 0.505 | neutral | N | 0.503426692 | None | None | N |
E/F | 0.9649 | likely_pathogenic | 0.9728 | pathogenic | -0.494 | Destabilizing | 0.999 | D | 0.585 | neutral | None | None | None | None | N |
E/G | 0.4859 | ambiguous | 0.5414 | ambiguous | -0.806 | Destabilizing | 0.892 | D | 0.438 | neutral | N | 0.500717667 | None | None | N |
E/H | 0.8628 | likely_pathogenic | 0.8915 | pathogenic | -0.521 | Destabilizing | 0.997 | D | 0.453 | neutral | None | None | None | None | N |
E/I | 0.7525 | likely_pathogenic | 0.7977 | pathogenic | 0.005 | Stabilizing | 0.987 | D | 0.601 | neutral | None | None | None | None | N |
E/K | 0.4088 | ambiguous | 0.4751 | ambiguous | 0.068 | Stabilizing | 0.805 | D | 0.521 | neutral | N | 0.491056429 | None | None | N |
E/L | 0.8391 | likely_pathogenic | 0.8812 | pathogenic | 0.005 | Stabilizing | 0.975 | D | 0.529 | neutral | None | None | None | None | N |
E/M | 0.81 | likely_pathogenic | 0.8508 | pathogenic | 0.284 | Stabilizing | 0.999 | D | 0.507 | neutral | None | None | None | None | N |
E/N | 0.6625 | likely_pathogenic | 0.7174 | pathogenic | -0.201 | Destabilizing | 0.987 | D | 0.484 | neutral | None | None | None | None | N |
E/P | 0.675 | likely_pathogenic | 0.7323 | pathogenic | -0.168 | Destabilizing | 0.033 | N | 0.266 | neutral | None | None | None | None | N |
E/Q | 0.3479 | ambiguous | 0.3893 | ambiguous | -0.178 | Destabilizing | 0.426 | N | 0.264 | neutral | N | 0.516422718 | None | None | N |
E/R | 0.5948 | likely_pathogenic | 0.6538 | pathogenic | 0.218 | Stabilizing | 0.975 | D | 0.483 | neutral | None | None | None | None | N |
E/S | 0.4588 | ambiguous | 0.5046 | ambiguous | -0.391 | Destabilizing | 0.916 | D | 0.5 | neutral | None | None | None | None | N |
E/T | 0.5409 | ambiguous | 0.6004 | pathogenic | -0.21 | Destabilizing | 0.975 | D | 0.366 | neutral | None | None | None | None | N |
E/V | 0.542 | ambiguous | 0.6019 | pathogenic | -0.168 | Destabilizing | 0.983 | D | 0.457 | neutral | N | 0.507212127 | None | None | N |
E/W | 0.9909 | likely_pathogenic | 0.9931 | pathogenic | -0.338 | Destabilizing | 0.999 | D | 0.628 | neutral | None | None | None | None | N |
E/Y | 0.94 | likely_pathogenic | 0.9547 | pathogenic | -0.254 | Destabilizing | 0.996 | D | 0.53 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.