Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28232 | 84919;84920;84921 | chr2:178561438;178561437;178561436 | chr2:179426165;179426164;179426163 |
N2AB | 26591 | 79996;79997;79998 | chr2:178561438;178561437;178561436 | chr2:179426165;179426164;179426163 |
N2A | 25664 | 77215;77216;77217 | chr2:178561438;178561437;178561436 | chr2:179426165;179426164;179426163 |
N2B | 19167 | 57724;57725;57726 | chr2:178561438;178561437;178561436 | chr2:179426165;179426164;179426163 |
Novex-1 | 19292 | 58099;58100;58101 | chr2:178561438;178561437;178561436 | chr2:179426165;179426164;179426163 |
Novex-2 | 19359 | 58300;58301;58302 | chr2:178561438;178561437;178561436 | chr2:179426165;179426164;179426163 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs397517730 | -1.599 | 0.822 | N | 0.481 | 0.279 | 0.231873229951 | gnomAD-2.1.1 | 2.49471E-04 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.99333E-03 | None | 0 | 0 | 1.65837E-04 |
E/D | rs397517730 | -1.599 | 0.822 | N | 0.481 | 0.279 | 0.231873229951 | gnomAD-3.1.2 | 5.92E-05 | None | None | None | None | I | None | 4.82E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 1.44748E-03 | 0 |
E/D | rs397517730 | -1.599 | 0.822 | N | 0.481 | 0.279 | 0.231873229951 | 1000 genomes | 7.98722E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 4.1E-03 | None |
E/D | rs397517730 | -1.599 | 0.822 | N | 0.481 | 0.279 | 0.231873229951 | gnomAD-4.0.0 | 1.14634E-04 | None | None | None | None | I | None | 3.99765E-05 | 0 | None | 0 | 0 | None | 0 | 3.30033E-04 | 8.47619E-07 | 1.86633E-03 | 1.44037E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6724 | likely_pathogenic | 0.6431 | pathogenic | -0.855 | Destabilizing | 0.698 | D | 0.543 | neutral | N | 0.464403344 | None | None | I |
E/C | 0.9729 | likely_pathogenic | 0.9688 | pathogenic | -0.53 | Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | I |
E/D | 0.9301 | likely_pathogenic | 0.9136 | pathogenic | -1.583 | Destabilizing | 0.822 | D | 0.481 | neutral | N | 0.49984184 | None | None | I |
E/F | 0.9898 | likely_pathogenic | 0.9882 | pathogenic | -0.313 | Destabilizing | 0.956 | D | 0.787 | deleterious | None | None | None | None | I |
E/G | 0.8596 | likely_pathogenic | 0.8365 | pathogenic | -1.307 | Destabilizing | 0.971 | D | 0.688 | prob.neutral | N | 0.50658979 | None | None | I |
E/H | 0.9476 | likely_pathogenic | 0.9397 | pathogenic | -0.621 | Destabilizing | 0.994 | D | 0.593 | neutral | None | None | None | None | I |
E/I | 0.8229 | likely_pathogenic | 0.8179 | pathogenic | 0.414 | Stabilizing | 0.787 | D | 0.716 | prob.delet. | None | None | None | None | I |
E/K | 0.589 | likely_pathogenic | 0.5694 | pathogenic | -1.088 | Destabilizing | 0.698 | D | 0.484 | neutral | N | 0.468544401 | None | None | I |
E/L | 0.9117 | likely_pathogenic | 0.9103 | pathogenic | 0.414 | Stabilizing | 0.754 | D | 0.659 | neutral | None | None | None | None | I |
E/M | 0.8507 | likely_pathogenic | 0.8294 | pathogenic | 1.052 | Stabilizing | 0.988 | D | 0.735 | prob.delet. | None | None | None | None | I |
E/N | 0.9379 | likely_pathogenic | 0.9187 | pathogenic | -1.588 | Destabilizing | 0.978 | D | 0.567 | neutral | None | None | None | None | I |
E/P | 0.9995 | likely_pathogenic | 0.9994 | pathogenic | 0.012 | Stabilizing | 0.993 | D | 0.721 | prob.delet. | None | None | None | None | I |
E/Q | 0.2895 | likely_benign | 0.2751 | benign | -1.298 | Destabilizing | 0.294 | N | 0.353 | neutral | N | 0.509936676 | None | None | I |
E/R | 0.7654 | likely_pathogenic | 0.7645 | pathogenic | -0.916 | Destabilizing | 0.956 | D | 0.559 | neutral | None | None | None | None | I |
E/S | 0.8072 | likely_pathogenic | 0.7606 | pathogenic | -2.079 | Highly Destabilizing | 0.86 | D | 0.497 | neutral | None | None | None | None | I |
E/T | 0.8234 | likely_pathogenic | 0.7946 | pathogenic | -1.677 | Destabilizing | 0.86 | D | 0.634 | neutral | None | None | None | None | I |
E/V | 0.5963 | likely_pathogenic | 0.5992 | pathogenic | 0.012 | Stabilizing | 0.032 | N | 0.416 | neutral | N | 0.468505767 | None | None | I |
E/W | 0.9971 | likely_pathogenic | 0.9967 | pathogenic | -0.275 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | I |
E/Y | 0.9844 | likely_pathogenic | 0.9813 | pathogenic | -0.098 | Destabilizing | 0.978 | D | 0.754 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.