Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28237 | 84934;84935;84936 | chr2:178561423;178561422;178561421 | chr2:179426150;179426149;179426148 |
N2AB | 26596 | 80011;80012;80013 | chr2:178561423;178561422;178561421 | chr2:179426150;179426149;179426148 |
N2A | 25669 | 77230;77231;77232 | chr2:178561423;178561422;178561421 | chr2:179426150;179426149;179426148 |
N2B | 19172 | 57739;57740;57741 | chr2:178561423;178561422;178561421 | chr2:179426150;179426149;179426148 |
Novex-1 | 19297 | 58114;58115;58116 | chr2:178561423;178561422;178561421 | chr2:179426150;179426149;179426148 |
Novex-2 | 19364 | 58315;58316;58317 | chr2:178561423;178561422;178561421 | chr2:179426150;179426149;179426148 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs1703616150 | None | 0.971 | N | 0.724 | 0.244 | 0.343101102393 | gnomAD-4.0.0 | 2.73681E-06 | None | None | None | None | I | None | 2.98793E-05 | 6.70811E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/S | rs1479599357 | -1.622 | 0.698 | N | 0.75 | 0.33 | 0.663906303568 | gnomAD-4.0.0 | 1.59123E-06 | None | None | None | None | I | None | 0 | 2.28634E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2296 | likely_benign | 0.2206 | benign | -1.357 | Destabilizing | 0.754 | D | 0.633 | neutral | None | None | None | None | I |
I/C | 0.6744 | likely_pathogenic | 0.6691 | pathogenic | -0.838 | Destabilizing | 0.998 | D | 0.748 | deleterious | None | None | None | None | I |
I/D | 0.8603 | likely_pathogenic | 0.8245 | pathogenic | -0.629 | Destabilizing | 0.956 | D | 0.816 | deleterious | None | None | None | None | I |
I/E | 0.6973 | likely_pathogenic | 0.6756 | pathogenic | -0.661 | Destabilizing | 0.956 | D | 0.813 | deleterious | None | None | None | None | I |
I/F | 0.2088 | likely_benign | 0.2021 | benign | -1.013 | Destabilizing | 0.971 | D | 0.721 | prob.delet. | N | 0.491348129 | None | None | I |
I/G | 0.7297 | likely_pathogenic | 0.6917 | pathogenic | -1.632 | Destabilizing | 0.956 | D | 0.797 | deleterious | None | None | None | None | I |
I/H | 0.6732 | likely_pathogenic | 0.6469 | pathogenic | -0.732 | Destabilizing | 0.998 | D | 0.818 | deleterious | None | None | None | None | I |
I/K | 0.4412 | ambiguous | 0.4361 | ambiguous | -0.796 | Destabilizing | 0.956 | D | 0.814 | deleterious | None | None | None | None | I |
I/L | 0.1299 | likely_benign | 0.1307 | benign | -0.699 | Destabilizing | 0.489 | N | 0.392 | neutral | N | 0.448287998 | None | None | I |
I/M | 0.1199 | likely_benign | 0.1201 | benign | -0.582 | Destabilizing | 0.971 | D | 0.724 | prob.delet. | N | 0.486846386 | None | None | I |
I/N | 0.4875 | ambiguous | 0.4426 | ambiguous | -0.559 | Destabilizing | 0.942 | D | 0.82 | deleterious | N | 0.468843435 | None | None | I |
I/P | 0.5792 | likely_pathogenic | 0.5332 | ambiguous | -0.885 | Destabilizing | 0.978 | D | 0.823 | deleterious | None | None | None | None | I |
I/Q | 0.5554 | ambiguous | 0.537 | ambiguous | -0.77 | Destabilizing | 0.978 | D | 0.824 | deleterious | None | None | None | None | I |
I/R | 0.3555 | ambiguous | 0.3468 | ambiguous | -0.167 | Destabilizing | 0.956 | D | 0.819 | deleterious | None | None | None | None | I |
I/S | 0.3522 | ambiguous | 0.3239 | benign | -1.157 | Destabilizing | 0.698 | D | 0.75 | deleterious | N | 0.520457527 | None | None | I |
I/T | 0.107 | likely_benign | 0.109 | benign | -1.068 | Destabilizing | 0.014 | N | 0.437 | neutral | N | 0.502045125 | None | None | I |
I/V | 0.0669 | likely_benign | 0.0682 | benign | -0.885 | Destabilizing | 0.294 | N | 0.358 | neutral | N | 0.454117892 | None | None | I |
I/W | 0.8303 | likely_pathogenic | 0.8179 | pathogenic | -1.006 | Destabilizing | 0.998 | D | 0.796 | deleterious | None | None | None | None | I |
I/Y | 0.6383 | likely_pathogenic | 0.6189 | pathogenic | -0.796 | Destabilizing | 0.993 | D | 0.753 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.