Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28239 | 84940;84941;84942 | chr2:178561417;178561416;178561415 | chr2:179426144;179426143;179426142 |
N2AB | 26598 | 80017;80018;80019 | chr2:178561417;178561416;178561415 | chr2:179426144;179426143;179426142 |
N2A | 25671 | 77236;77237;77238 | chr2:178561417;178561416;178561415 | chr2:179426144;179426143;179426142 |
N2B | 19174 | 57745;57746;57747 | chr2:178561417;178561416;178561415 | chr2:179426144;179426143;179426142 |
Novex-1 | 19299 | 58120;58121;58122 | chr2:178561417;178561416;178561415 | chr2:179426144;179426143;179426142 |
Novex-2 | 19366 | 58321;58322;58323 | chr2:178561417;178561416;178561415 | chr2:179426144;179426143;179426142 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | None | None | 0.939 | N | 0.547 | 0.354 | 0.489449420884 | gnomAD-4.0.0 | 1.36842E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79892E-06 | 0 | 0 |
K/R | None | None | 0.684 | N | 0.581 | 0.132 | 0.28798054836 | gnomAD-4.0.0 | 6.84211E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9946E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.556 | ambiguous | 0.4665 | ambiguous | 0.033 | Stabilizing | 0.543 | D | 0.497 | neutral | None | None | None | None | I |
K/C | 0.8185 | likely_pathogenic | 0.7752 | pathogenic | -0.267 | Destabilizing | 0.996 | D | 0.589 | neutral | None | None | None | None | I |
K/D | 0.7942 | likely_pathogenic | 0.7537 | pathogenic | -0.177 | Destabilizing | 0.59 | D | 0.537 | neutral | None | None | None | None | I |
K/E | 0.4565 | ambiguous | 0.3722 | ambiguous | -0.188 | Destabilizing | 0.007 | N | 0.18 | neutral | N | 0.44144217 | None | None | I |
K/F | 0.9044 | likely_pathogenic | 0.8781 | pathogenic | -0.263 | Destabilizing | 0.984 | D | 0.543 | neutral | None | None | None | None | I |
K/G | 0.6928 | likely_pathogenic | 0.6314 | pathogenic | -0.122 | Destabilizing | 0.742 | D | 0.56 | neutral | None | None | None | None | I |
K/H | 0.4992 | ambiguous | 0.4496 | ambiguous | -0.305 | Destabilizing | 0.953 | D | 0.547 | neutral | None | None | None | None | I |
K/I | 0.5887 | likely_pathogenic | 0.5113 | ambiguous | 0.359 | Stabilizing | 0.939 | D | 0.547 | neutral | N | 0.480865439 | None | None | I |
K/L | 0.5885 | likely_pathogenic | 0.5149 | ambiguous | 0.359 | Stabilizing | 0.742 | D | 0.562 | neutral | None | None | None | None | I |
K/M | 0.5055 | ambiguous | 0.4366 | ambiguous | 0.1 | Stabilizing | 0.996 | D | 0.547 | neutral | None | None | None | None | I |
K/N | 0.6799 | likely_pathogenic | 0.6179 | pathogenic | 0.181 | Stabilizing | 0.684 | D | 0.541 | neutral | N | 0.472116027 | None | None | I |
K/P | 0.5408 | ambiguous | 0.4662 | ambiguous | 0.276 | Stabilizing | 0.004 | N | 0.207 | neutral | None | None | None | None | I |
K/Q | 0.2636 | likely_benign | 0.214 | benign | None | Stabilizing | 0.521 | D | 0.61 | neutral | N | 0.500663832 | None | None | I |
K/R | 0.1012 | likely_benign | 0.0913 | benign | -0.019 | Destabilizing | 0.684 | D | 0.581 | neutral | N | 0.496892808 | None | None | I |
K/S | 0.6637 | likely_pathogenic | 0.5984 | pathogenic | -0.228 | Destabilizing | 0.742 | D | 0.503 | neutral | None | None | None | None | I |
K/T | 0.4319 | ambiguous | 0.3589 | ambiguous | -0.111 | Destabilizing | 0.684 | D | 0.565 | neutral | N | 0.471862537 | None | None | I |
K/V | 0.5559 | ambiguous | 0.4746 | ambiguous | 0.276 | Stabilizing | 0.854 | D | 0.553 | neutral | None | None | None | None | I |
K/W | 0.9056 | likely_pathogenic | 0.8906 | pathogenic | -0.324 | Destabilizing | 0.996 | D | 0.676 | prob.neutral | None | None | None | None | I |
K/Y | 0.7948 | likely_pathogenic | 0.7605 | pathogenic | 0.033 | Stabilizing | 0.984 | D | 0.555 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.