Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28244 | 84955;84956;84957 | chr2:178561402;178561401;178561400 | chr2:179426129;179426128;179426127 |
N2AB | 26603 | 80032;80033;80034 | chr2:178561402;178561401;178561400 | chr2:179426129;179426128;179426127 |
N2A | 25676 | 77251;77252;77253 | chr2:178561402;178561401;178561400 | chr2:179426129;179426128;179426127 |
N2B | 19179 | 57760;57761;57762 | chr2:178561402;178561401;178561400 | chr2:179426129;179426128;179426127 |
Novex-1 | 19304 | 58135;58136;58137 | chr2:178561402;178561401;178561400 | chr2:179426129;179426128;179426127 |
Novex-2 | 19371 | 58336;58337;58338 | chr2:178561402;178561401;178561400 | chr2:179426129;179426128;179426127 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | rs1249814057 | -0.882 | 0.779 | N | 0.695 | 0.252 | 0.479056812784 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
C/R | rs1249814057 | -0.882 | 0.779 | N | 0.695 | 0.252 | 0.479056812784 | gnomAD-4.0.0 | 1.59125E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85817E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.4643 | ambiguous | 0.3838 | ambiguous | -1.648 | Destabilizing | 0.107 | N | 0.373 | neutral | None | None | None | None | N |
C/D | 0.9453 | likely_pathogenic | 0.9156 | pathogenic | -0.792 | Destabilizing | 0.571 | D | 0.652 | prob.neutral | None | None | None | None | N |
C/E | 0.9866 | likely_pathogenic | 0.9776 | pathogenic | -0.682 | Destabilizing | 0.571 | D | 0.645 | neutral | None | None | None | None | N |
C/F | 0.7847 | likely_pathogenic | 0.7362 | pathogenic | -0.977 | Destabilizing | 0.877 | D | 0.631 | neutral | N | 0.492732208 | None | None | N |
C/G | 0.2281 | likely_benign | 0.1813 | benign | -1.96 | Destabilizing | 0.172 | N | 0.585 | neutral | N | 0.455811403 | None | None | N |
C/H | 0.9332 | likely_pathogenic | 0.9047 | pathogenic | -2.08 | Highly Destabilizing | 0.991 | D | 0.737 | deleterious | None | None | None | None | N |
C/I | 0.8836 | likely_pathogenic | 0.8456 | pathogenic | -0.843 | Destabilizing | 0.73 | D | 0.571 | neutral | None | None | None | None | N |
C/K | 0.9933 | likely_pathogenic | 0.9881 | pathogenic | -1.22 | Destabilizing | 0.571 | D | 0.653 | prob.neutral | None | None | None | None | N |
C/L | 0.8152 | likely_pathogenic | 0.7688 | pathogenic | -0.843 | Destabilizing | 0.355 | N | 0.578 | neutral | None | None | None | None | N |
C/M | 0.8658 | likely_pathogenic | 0.8411 | pathogenic | 0.066 | Stabilizing | 0.966 | D | 0.581 | neutral | None | None | None | None | N |
C/N | 0.8141 | likely_pathogenic | 0.767 | pathogenic | -1.198 | Destabilizing | 0.571 | D | 0.651 | prob.neutral | None | None | None | None | N |
C/P | 0.9835 | likely_pathogenic | 0.9722 | pathogenic | -1.086 | Destabilizing | 0.905 | D | 0.7 | prob.delet. | None | None | None | None | N |
C/Q | 0.9632 | likely_pathogenic | 0.9395 | pathogenic | -1.105 | Destabilizing | 0.824 | D | 0.713 | prob.delet. | None | None | None | None | N |
C/R | 0.9609 | likely_pathogenic | 0.9321 | pathogenic | -1.112 | Destabilizing | 0.779 | D | 0.695 | prob.delet. | N | 0.47370373 | None | None | N |
C/S | 0.1569 | likely_benign | 0.1385 | benign | -1.684 | Destabilizing | 0.002 | N | 0.359 | neutral | N | 0.284112384 | None | None | N |
C/T | 0.3744 | ambiguous | 0.3208 | benign | -1.404 | Destabilizing | 0.216 | N | 0.539 | neutral | None | None | None | None | N |
C/V | 0.7179 | likely_pathogenic | 0.6559 | pathogenic | -1.086 | Destabilizing | 0.571 | D | 0.612 | neutral | None | None | None | None | N |
C/W | 0.9519 | likely_pathogenic | 0.9322 | pathogenic | -1.056 | Destabilizing | 0.988 | D | 0.723 | deleterious | N | 0.493599 | None | None | N |
C/Y | 0.9191 | likely_pathogenic | 0.8823 | pathogenic | -1.012 | Destabilizing | 0.956 | D | 0.636 | neutral | N | 0.492905567 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.