Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28245 | 84958;84959;84960 | chr2:178561399;178561398;178561397 | chr2:179426126;179426125;179426124 |
N2AB | 26604 | 80035;80036;80037 | chr2:178561399;178561398;178561397 | chr2:179426126;179426125;179426124 |
N2A | 25677 | 77254;77255;77256 | chr2:178561399;178561398;178561397 | chr2:179426126;179426125;179426124 |
N2B | 19180 | 57763;57764;57765 | chr2:178561399;178561398;178561397 | chr2:179426126;179426125;179426124 |
Novex-1 | 19305 | 58138;58139;58140 | chr2:178561399;178561398;178561397 | chr2:179426126;179426125;179426124 |
Novex-2 | 19372 | 58339;58340;58341 | chr2:178561399;178561398;178561397 | chr2:179426126;179426125;179426124 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1481882166 | None | 0.191 | N | 0.552 | 0.209 | 0.239901079897 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2138 | likely_benign | 0.1812 | benign | -0.129 | Destabilizing | 0.321 | N | 0.497 | neutral | N | 0.518900089 | None | None | I |
E/C | 0.8815 | likely_pathogenic | 0.8431 | pathogenic | -0.142 | Destabilizing | 0.981 | D | 0.752 | deleterious | None | None | None | None | I |
E/D | 0.0997 | likely_benign | 0.0894 | benign | -0.27 | Destabilizing | 0.001 | N | 0.15 | neutral | N | 0.432763972 | None | None | I |
E/F | 0.8075 | likely_pathogenic | 0.7456 | pathogenic | -0.128 | Destabilizing | 0.931 | D | 0.673 | prob.neutral | None | None | None | None | I |
E/G | 0.2598 | likely_benign | 0.2168 | benign | -0.271 | Destabilizing | 0.321 | N | 0.533 | neutral | N | 0.466832426 | None | None | I |
E/H | 0.592 | likely_pathogenic | 0.5237 | ambiguous | 0.394 | Stabilizing | 0.817 | D | 0.516 | neutral | None | None | None | None | I |
E/I | 0.4098 | ambiguous | 0.3497 | ambiguous | 0.195 | Stabilizing | 0.817 | D | 0.689 | prob.delet. | None | None | None | None | I |
E/K | 0.2386 | likely_benign | 0.204 | benign | 0.373 | Stabilizing | 0.191 | N | 0.552 | neutral | N | 0.518246728 | None | None | I |
E/L | 0.4141 | ambiguous | 0.3572 | ambiguous | 0.195 | Stabilizing | 0.687 | D | 0.587 | neutral | None | None | None | None | I |
E/M | 0.5159 | ambiguous | 0.4688 | ambiguous | 0.044 | Stabilizing | 0.981 | D | 0.7 | prob.delet. | None | None | None | None | I |
E/N | 0.3072 | likely_benign | 0.254 | benign | 0.157 | Stabilizing | 0.239 | N | 0.517 | neutral | None | None | None | None | I |
E/P | 0.4175 | ambiguous | 0.3435 | ambiguous | 0.106 | Stabilizing | 0.817 | D | 0.592 | neutral | None | None | None | None | I |
E/Q | 0.1817 | likely_benign | 0.165 | benign | 0.165 | Stabilizing | 0.321 | N | 0.582 | neutral | N | 0.514128988 | None | None | I |
E/R | 0.4003 | ambiguous | 0.3475 | ambiguous | 0.632 | Stabilizing | 0.002 | N | 0.284 | neutral | None | None | None | None | I |
E/S | 0.2394 | likely_benign | 0.2031 | benign | -0.013 | Destabilizing | 0.239 | N | 0.481 | neutral | None | None | None | None | I |
E/T | 0.3073 | likely_benign | 0.2562 | benign | 0.105 | Stabilizing | 0.385 | N | 0.563 | neutral | None | None | None | None | I |
E/V | 0.2715 | likely_benign | 0.2303 | benign | 0.106 | Stabilizing | 0.771 | D | 0.598 | neutral | N | 0.477477489 | None | None | I |
E/W | 0.9368 | likely_pathogenic | 0.9132 | pathogenic | -0.049 | Destabilizing | 0.981 | D | 0.785 | deleterious | None | None | None | None | I |
E/Y | 0.6717 | likely_pathogenic | 0.609 | pathogenic | 0.105 | Stabilizing | 0.931 | D | 0.707 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.