Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28248 | 84967;84968;84969 | chr2:178561390;178561389;178561388 | chr2:179426117;179426116;179426115 |
N2AB | 26607 | 80044;80045;80046 | chr2:178561390;178561389;178561388 | chr2:179426117;179426116;179426115 |
N2A | 25680 | 77263;77264;77265 | chr2:178561390;178561389;178561388 | chr2:179426117;179426116;179426115 |
N2B | 19183 | 57772;57773;57774 | chr2:178561390;178561389;178561388 | chr2:179426117;179426116;179426115 |
Novex-1 | 19308 | 58147;58148;58149 | chr2:178561390;178561389;178561388 | chr2:179426117;179426116;179426115 |
Novex-2 | 19375 | 58348;58349;58350 | chr2:178561390;178561389;178561388 | chr2:179426117;179426116;179426115 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.049 | N | 0.381 | 0.139 | 0.277730125212 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
P/T | None | None | 0.049 | N | 0.393 | 0.046 | 0.139678290688 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0535 | likely_benign | 0.0516 | benign | -1.233 | Destabilizing | None | N | 0.231 | neutral | N | 0.331636972 | None | None | N |
P/C | 0.4374 | ambiguous | 0.3818 | ambiguous | -0.697 | Destabilizing | 0.703 | D | 0.482 | neutral | None | None | None | None | N |
P/D | 0.7228 | likely_pathogenic | 0.6849 | pathogenic | -1.209 | Destabilizing | 0.25 | N | 0.534 | neutral | None | None | None | None | N |
P/E | 0.4242 | ambiguous | 0.3774 | ambiguous | -1.275 | Destabilizing | 0.25 | N | 0.47 | neutral | None | None | None | None | N |
P/F | 0.3784 | ambiguous | 0.3345 | benign | -1.171 | Destabilizing | 0.538 | D | 0.53 | neutral | None | None | None | None | N |
P/G | 0.3715 | ambiguous | 0.3517 | ambiguous | -1.478 | Destabilizing | 0.064 | N | 0.421 | neutral | None | None | None | None | N |
P/H | 0.3166 | likely_benign | 0.2672 | benign | -1.057 | Destabilizing | 0.845 | D | 0.434 | neutral | N | 0.434686769 | None | None | N |
P/I | 0.2037 | likely_benign | 0.1852 | benign | -0.685 | Destabilizing | 0.143 | N | 0.451 | neutral | None | None | None | None | N |
P/K | 0.4388 | ambiguous | 0.3821 | ambiguous | -1.063 | Destabilizing | 0.25 | N | 0.457 | neutral | None | None | None | None | N |
P/L | 0.0943 | likely_benign | 0.0856 | benign | -0.685 | Destabilizing | 0.049 | N | 0.381 | neutral | N | 0.356724631 | None | None | N |
P/M | 0.22 | likely_benign | 0.2059 | benign | -0.405 | Destabilizing | 0.703 | D | 0.449 | neutral | None | None | None | None | N |
P/N | 0.5043 | ambiguous | 0.4706 | ambiguous | -0.713 | Destabilizing | 0.25 | N | 0.519 | neutral | None | None | None | None | N |
P/Q | 0.2278 | likely_benign | 0.1948 | benign | -0.977 | Destabilizing | 0.703 | D | 0.485 | neutral | None | None | None | None | N |
P/R | 0.3003 | likely_benign | 0.2433 | benign | -0.445 | Destabilizing | 0.201 | N | 0.539 | neutral | N | 0.415580934 | None | None | N |
P/S | 0.147 | likely_benign | 0.1389 | benign | -1.116 | Destabilizing | 0.004 | N | 0.263 | neutral | N | 0.385778102 | None | None | N |
P/T | 0.1073 | likely_benign | 0.1028 | benign | -1.086 | Destabilizing | 0.049 | N | 0.393 | neutral | N | 0.40552615 | None | None | N |
P/V | 0.1258 | likely_benign | 0.1188 | benign | -0.833 | Destabilizing | None | N | 0.327 | neutral | None | None | None | None | N |
P/W | 0.6377 | likely_pathogenic | 0.5768 | pathogenic | -1.303 | Destabilizing | 0.964 | D | 0.578 | neutral | None | None | None | None | N |
P/Y | 0.4193 | ambiguous | 0.3689 | ambiguous | -1.035 | Destabilizing | 0.703 | D | 0.518 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.