Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28254 | 84985;84986;84987 | chr2:178561372;178561371;178561370 | chr2:179426099;179426098;179426097 |
N2AB | 26613 | 80062;80063;80064 | chr2:178561372;178561371;178561370 | chr2:179426099;179426098;179426097 |
N2A | 25686 | 77281;77282;77283 | chr2:178561372;178561371;178561370 | chr2:179426099;179426098;179426097 |
N2B | 19189 | 57790;57791;57792 | chr2:178561372;178561371;178561370 | chr2:179426099;179426098;179426097 |
Novex-1 | 19314 | 58165;58166;58167 | chr2:178561372;178561371;178561370 | chr2:179426099;179426098;179426097 |
Novex-2 | 19381 | 58366;58367;58368 | chr2:178561372;178561371;178561370 | chr2:179426099;179426098;179426097 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.684 | N | 0.542 | 0.332 | 0.247872288689 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3796 | ambiguous | 0.3411 | ambiguous | -0.559 | Destabilizing | 0.028 | N | 0.522 | neutral | N | 0.463567197 | None | None | N |
D/C | 0.8367 | likely_pathogenic | 0.8251 | pathogenic | -0.341 | Destabilizing | 0.996 | D | 0.804 | deleterious | None | None | None | None | N |
D/E | 0.3738 | ambiguous | 0.3428 | ambiguous | -0.763 | Destabilizing | 0.012 | N | 0.292 | neutral | N | 0.4681491 | None | None | N |
D/F | 0.7703 | likely_pathogenic | 0.7593 | pathogenic | -0.304 | Destabilizing | 0.953 | D | 0.821 | deleterious | None | None | None | None | N |
D/G | 0.4334 | ambiguous | 0.4209 | ambiguous | -0.916 | Destabilizing | 0.003 | N | 0.428 | neutral | N | 0.506392152 | None | None | N |
D/H | 0.574 | likely_pathogenic | 0.5495 | ambiguous | -0.807 | Destabilizing | 0.979 | D | 0.715 | prob.delet. | D | 0.525882133 | None | None | N |
D/I | 0.7637 | likely_pathogenic | 0.7321 | pathogenic | 0.385 | Stabilizing | 0.953 | D | 0.805 | deleterious | None | None | None | None | N |
D/K | 0.7835 | likely_pathogenic | 0.7588 | pathogenic | -0.81 | Destabilizing | 0.742 | D | 0.608 | neutral | None | None | None | None | N |
D/L | 0.6053 | likely_pathogenic | 0.5721 | pathogenic | 0.385 | Stabilizing | 0.742 | D | 0.765 | deleterious | None | None | None | None | N |
D/M | 0.8244 | likely_pathogenic | 0.8043 | pathogenic | 0.853 | Stabilizing | 0.996 | D | 0.812 | deleterious | None | None | None | None | N |
D/N | 0.2682 | likely_benign | 0.2466 | benign | -1.082 | Destabilizing | 0.684 | D | 0.542 | neutral | N | 0.497863149 | None | None | N |
D/P | 0.9662 | likely_pathogenic | 0.9591 | pathogenic | 0.095 | Stabilizing | 0.953 | D | 0.693 | prob.neutral | None | None | None | None | N |
D/Q | 0.642 | likely_pathogenic | 0.5971 | pathogenic | -0.912 | Destabilizing | 0.742 | D | 0.571 | neutral | None | None | None | None | N |
D/R | 0.8072 | likely_pathogenic | 0.775 | pathogenic | -0.705 | Destabilizing | 0.91 | D | 0.747 | deleterious | None | None | None | None | N |
D/S | 0.235 | likely_benign | 0.2022 | benign | -1.375 | Destabilizing | 0.037 | N | 0.378 | neutral | None | None | None | None | N |
D/T | 0.628 | likely_pathogenic | 0.5728 | pathogenic | -1.093 | Destabilizing | 0.59 | D | 0.613 | neutral | None | None | None | None | N |
D/V | 0.6113 | likely_pathogenic | 0.5621 | ambiguous | 0.095 | Stabilizing | 0.684 | D | 0.761 | deleterious | N | 0.515286296 | None | None | N |
D/W | 0.9627 | likely_pathogenic | 0.96 | pathogenic | -0.247 | Destabilizing | 0.996 | D | 0.811 | deleterious | None | None | None | None | N |
D/Y | 0.4258 | ambiguous | 0.3945 | ambiguous | -0.13 | Destabilizing | 0.979 | D | 0.819 | deleterious | N | 0.515032806 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.