Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28255 | 84988;84989;84990 | chr2:178561369;178561368;178561367 | chr2:179426096;179426095;179426094 |
N2AB | 26614 | 80065;80066;80067 | chr2:178561369;178561368;178561367 | chr2:179426096;179426095;179426094 |
N2A | 25687 | 77284;77285;77286 | chr2:178561369;178561368;178561367 | chr2:179426096;179426095;179426094 |
N2B | 19190 | 57793;57794;57795 | chr2:178561369;178561368;178561367 | chr2:179426096;179426095;179426094 |
Novex-1 | 19315 | 58168;58169;58170 | chr2:178561369;178561368;178561367 | chr2:179426096;179426095;179426094 |
Novex-2 | 19382 | 58369;58370;58371 | chr2:178561369;178561368;178561367 | chr2:179426096;179426095;179426094 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1703598147 | None | 0.999 | D | 0.848 | 0.495 | 0.782479200985 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/S | rs1703599575 | None | 0.905 | N | 0.453 | 0.334 | 0.249502417897 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.57E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/S | rs1703599575 | None | 0.905 | N | 0.453 | 0.334 | 0.249502417897 | gnomAD-4.0.0 | 6.5799E-06 | None | None | None | None | N | None | 0 | 6.56513E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0972 | likely_benign | 0.0793 | benign | -1.42 | Destabilizing | 0.992 | D | 0.75 | deleterious | N | 0.492521565 | None | None | N |
P/C | 0.5015 | ambiguous | 0.5133 | ambiguous | -1.118 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
P/D | 0.8802 | likely_pathogenic | 0.862 | pathogenic | -2.395 | Highly Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
P/E | 0.5559 | ambiguous | 0.5326 | ambiguous | -2.426 | Highly Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
P/F | 0.6723 | likely_pathogenic | 0.6673 | pathogenic | -1.372 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
P/G | 0.5205 | ambiguous | 0.4994 | ambiguous | -1.688 | Destabilizing | 0.997 | D | 0.807 | deleterious | None | None | None | None | N |
P/H | 0.3383 | likely_benign | 0.3502 | ambiguous | -1.287 | Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.525711684 | None | None | N |
P/I | 0.4279 | ambiguous | 0.4268 | ambiguous | -0.777 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
P/K | 0.3496 | ambiguous | 0.3481 | ambiguous | -1.188 | Destabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | N |
P/L | 0.2372 | likely_benign | 0.2477 | benign | -0.777 | Destabilizing | 0.999 | D | 0.848 | deleterious | D | 0.536979084 | None | None | N |
P/M | 0.4542 | ambiguous | 0.4787 | ambiguous | -0.51 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
P/N | 0.6885 | likely_pathogenic | 0.6721 | pathogenic | -1.118 | Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
P/Q | 0.2638 | likely_benign | 0.27 | benign | -1.402 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
P/R | 0.2177 | likely_benign | 0.2216 | benign | -0.622 | Destabilizing | 0.999 | D | 0.891 | deleterious | N | 0.50361773 | None | None | N |
P/S | 0.2098 | likely_benign | 0.1776 | benign | -1.441 | Destabilizing | 0.905 | D | 0.453 | neutral | N | 0.50400935 | None | None | N |
P/T | 0.226 | likely_benign | 0.2122 | benign | -1.383 | Destabilizing | 0.992 | D | 0.798 | deleterious | N | 0.5116199 | None | None | N |
P/V | 0.3092 | likely_benign | 0.2941 | benign | -0.96 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
P/W | 0.8308 | likely_pathogenic | 0.8465 | pathogenic | -1.602 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
P/Y | 0.6756 | likely_pathogenic | 0.6668 | pathogenic | -1.284 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.