Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28260 | 85003;85004;85005 | chr2:178561354;178561353;178561352 | chr2:179426081;179426080;179426079 |
N2AB | 26619 | 80080;80081;80082 | chr2:178561354;178561353;178561352 | chr2:179426081;179426080;179426079 |
N2A | 25692 | 77299;77300;77301 | chr2:178561354;178561353;178561352 | chr2:179426081;179426080;179426079 |
N2B | 19195 | 57808;57809;57810 | chr2:178561354;178561353;178561352 | chr2:179426081;179426080;179426079 |
Novex-1 | 19320 | 58183;58184;58185 | chr2:178561354;178561353;178561352 | chr2:179426081;179426080;179426079 |
Novex-2 | 19387 | 58384;58385;58386 | chr2:178561354;178561353;178561352 | chr2:179426081;179426080;179426079 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs370547473 | -0.905 | 0.071 | N | 0.163 | 0.122 | 0.199424873507 | gnomAD-2.1.1 | 4.02E-05 | None | None | None | None | N | None | 0 | 2.31777E-04 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 1.65782E-04 |
E/D | rs370547473 | -0.905 | 0.071 | N | 0.163 | 0.122 | 0.199424873507 | gnomAD-3.1.2 | 9.2E-05 | None | None | None | None | N | None | 2.41E-05 | 8.52124E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs370547473 | -0.905 | 0.071 | N | 0.163 | 0.122 | 0.199424873507 | gnomAD-4.0.0 | 1.79707E-05 | None | None | None | None | N | None | 1.33469E-05 | 3.66801E-04 | None | 0 | 0 | None | 0 | 0 | 3.39036E-06 | 0 | 3.20215E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1721 | likely_benign | 0.1684 | benign | -0.627 | Destabilizing | 0.961 | D | 0.51 | neutral | N | 0.477863245 | None | None | N |
E/C | 0.7945 | likely_pathogenic | 0.7968 | pathogenic | -0.363 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/D | 0.2008 | likely_benign | 0.2138 | benign | -0.78 | Destabilizing | 0.071 | N | 0.163 | neutral | N | 0.487168862 | None | None | N |
E/F | 0.697 | likely_pathogenic | 0.6843 | pathogenic | -0.201 | Destabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | N |
E/G | 0.3233 | likely_benign | 0.3417 | ambiguous | -0.93 | Destabilizing | 0.98 | D | 0.587 | neutral | N | 0.497550889 | None | None | N |
E/H | 0.4393 | ambiguous | 0.4291 | ambiguous | -0.309 | Destabilizing | 0.999 | D | 0.552 | neutral | None | None | None | None | N |
E/I | 0.2044 | likely_benign | 0.1911 | benign | 0.177 | Stabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
E/K | 0.159 | likely_benign | 0.1481 | benign | -0.345 | Destabilizing | 0.835 | D | 0.483 | neutral | N | 0.505490862 | None | None | N |
E/L | 0.3374 | likely_benign | 0.329 | benign | 0.177 | Stabilizing | 0.991 | D | 0.663 | neutral | None | None | None | None | N |
E/M | 0.3425 | ambiguous | 0.3315 | benign | 0.372 | Stabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/N | 0.3276 | likely_benign | 0.3249 | benign | -0.723 | Destabilizing | 0.97 | D | 0.478 | neutral | None | None | None | None | N |
E/P | 0.956 | likely_pathogenic | 0.9588 | pathogenic | -0.069 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | N |
E/Q | 0.1333 | likely_benign | 0.1284 | benign | -0.624 | Destabilizing | 0.961 | D | 0.493 | neutral | N | 0.520537672 | None | None | N |
E/R | 0.2557 | likely_benign | 0.243 | benign | -0.048 | Destabilizing | 0.092 | N | 0.189 | neutral | None | None | None | None | N |
E/S | 0.2417 | likely_benign | 0.2428 | benign | -0.952 | Destabilizing | 0.97 | D | 0.451 | neutral | None | None | None | None | N |
E/T | 0.1943 | likely_benign | 0.1852 | benign | -0.711 | Destabilizing | 0.985 | D | 0.553 | neutral | None | None | None | None | N |
E/V | 0.1199 | likely_benign | 0.1177 | benign | -0.069 | Destabilizing | 0.994 | D | 0.662 | neutral | N | 0.487638607 | None | None | N |
E/W | 0.8928 | likely_pathogenic | 0.8933 | pathogenic | 0.01 | Stabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
E/Y | 0.6146 | likely_pathogenic | 0.6084 | pathogenic | 0.031 | Stabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.