Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28265 | 85018;85019;85020 | chr2:178561339;178561338;178561337 | chr2:179426066;179426065;179426064 |
N2AB | 26624 | 80095;80096;80097 | chr2:178561339;178561338;178561337 | chr2:179426066;179426065;179426064 |
N2A | 25697 | 77314;77315;77316 | chr2:178561339;178561338;178561337 | chr2:179426066;179426065;179426064 |
N2B | 19200 | 57823;57824;57825 | chr2:178561339;178561338;178561337 | chr2:179426066;179426065;179426064 |
Novex-1 | 19325 | 58198;58199;58200 | chr2:178561339;178561338;178561337 | chr2:179426066;179426065;179426064 |
Novex-2 | 19392 | 58399;58400;58401 | chr2:178561339;178561338;178561337 | chr2:179426066;179426065;179426064 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | rs376874908 | None | 1.0 | N | 0.775 | 0.479 | None | gnomAD-4.0.0 | 1.5912E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85809E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.3881 | ambiguous | 0.4149 | ambiguous | -0.841 | Destabilizing | 0.999 | D | 0.48 | neutral | N | 0.492403236 | None | None | N |
T/C | 0.7621 | likely_pathogenic | 0.7626 | pathogenic | -0.821 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
T/D | 0.7322 | likely_pathogenic | 0.7244 | pathogenic | -1.315 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
T/E | 0.8512 | likely_pathogenic | 0.8555 | pathogenic | -1.264 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
T/F | 0.7822 | likely_pathogenic | 0.796 | pathogenic | -0.825 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
T/G | 0.3845 | ambiguous | 0.3879 | ambiguous | -1.136 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
T/H | 0.5948 | likely_pathogenic | 0.5824 | pathogenic | -1.426 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
T/I | 0.8665 | likely_pathogenic | 0.8881 | pathogenic | -0.131 | Destabilizing | 1.0 | D | 0.767 | deleterious | D | 0.534652134 | None | None | N |
T/K | 0.6271 | likely_pathogenic | 0.6093 | pathogenic | -0.92 | Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.485566381 | None | None | N |
T/L | 0.4339 | ambiguous | 0.4633 | ambiguous | -0.131 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
T/M | 0.3279 | likely_benign | 0.3622 | ambiguous | 0.124 | Stabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
T/N | 0.2503 | likely_benign | 0.2512 | benign | -1.18 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
T/P | 0.8672 | likely_pathogenic | 0.876 | pathogenic | -0.336 | Destabilizing | 1.0 | D | 0.749 | deleterious | D | 0.534652134 | None | None | N |
T/Q | 0.5919 | likely_pathogenic | 0.5855 | pathogenic | -1.331 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
T/R | 0.5714 | likely_pathogenic | 0.5649 | pathogenic | -0.682 | Destabilizing | 1.0 | D | 0.756 | deleterious | N | 0.48456565 | None | None | N |
T/S | 0.1499 | likely_benign | 0.1502 | benign | -1.321 | Destabilizing | 0.999 | D | 0.507 | neutral | N | 0.48992955 | None | None | N |
T/V | 0.7434 | likely_pathogenic | 0.7683 | pathogenic | -0.336 | Destabilizing | 0.999 | D | 0.564 | neutral | None | None | None | None | N |
T/W | 0.9284 | likely_pathogenic | 0.9341 | pathogenic | -0.837 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
T/Y | 0.784 | likely_pathogenic | 0.7874 | pathogenic | -0.543 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.