Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28275 | 85048;85049;85050 | chr2:178561309;178561308;178561307 | chr2:179426036;179426035;179426034 |
N2AB | 26634 | 80125;80126;80127 | chr2:178561309;178561308;178561307 | chr2:179426036;179426035;179426034 |
N2A | 25707 | 77344;77345;77346 | chr2:178561309;178561308;178561307 | chr2:179426036;179426035;179426034 |
N2B | 19210 | 57853;57854;57855 | chr2:178561309;178561308;178561307 | chr2:179426036;179426035;179426034 |
Novex-1 | 19335 | 58228;58229;58230 | chr2:178561309;178561308;178561307 | chr2:179426036;179426035;179426034 |
Novex-2 | 19402 | 58429;58430;58431 | chr2:178561309;178561308;178561307 | chr2:179426036;179426035;179426034 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs765009136 | -0.493 | 0.879 | N | 0.587 | 0.27 | 0.18995819373 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
K/N | rs765009136 | -0.493 | 0.879 | N | 0.587 | 0.27 | 0.18995819373 | gnomAD-4.0.0 | 1.3684E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79889E-06 | 0 | 0 |
K/Q | None | None | 0.879 | N | 0.627 | 0.237 | 0.159798565429 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3138 | likely_benign | 0.3421 | ambiguous | -0.552 | Destabilizing | 0.004 | N | 0.26 | neutral | None | None | None | None | N |
K/C | 0.6908 | likely_pathogenic | 0.7357 | pathogenic | -0.797 | Destabilizing | 0.973 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/D | 0.7777 | likely_pathogenic | 0.7915 | pathogenic | -0.406 | Destabilizing | 0.826 | D | 0.607 | neutral | None | None | None | None | N |
K/E | 0.2505 | likely_benign | 0.2573 | benign | -0.29 | Destabilizing | 0.505 | D | 0.599 | neutral | N | 0.477960331 | None | None | N |
K/F | 0.7857 | likely_pathogenic | 0.8255 | pathogenic | -0.416 | Destabilizing | 0.906 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/G | 0.5827 | likely_pathogenic | 0.6255 | pathogenic | -0.856 | Destabilizing | 0.004 | N | 0.367 | neutral | None | None | None | None | N |
K/H | 0.415 | ambiguous | 0.4494 | ambiguous | -0.92 | Destabilizing | 0.991 | D | 0.645 | neutral | None | None | None | None | N |
K/I | 0.337 | likely_benign | 0.3843 | ambiguous | 0.222 | Stabilizing | 0.782 | D | 0.687 | prob.neutral | N | 0.506918958 | None | None | N |
K/L | 0.3523 | ambiguous | 0.3954 | ambiguous | 0.222 | Stabilizing | 0.404 | N | 0.609 | neutral | None | None | None | None | N |
K/M | 0.2637 | likely_benign | 0.3014 | benign | -0.234 | Destabilizing | 0.973 | D | 0.645 | neutral | None | None | None | None | N |
K/N | 0.6575 | likely_pathogenic | 0.6911 | pathogenic | -0.596 | Destabilizing | 0.879 | D | 0.587 | neutral | N | 0.48685292 | None | None | N |
K/P | 0.3633 | ambiguous | 0.3769 | ambiguous | -0.009 | Destabilizing | 0.004 | N | 0.271 | neutral | None | None | None | None | N |
K/Q | 0.1491 | likely_benign | 0.1612 | benign | -0.555 | Destabilizing | 0.879 | D | 0.627 | neutral | N | 0.520481744 | None | None | N |
K/R | 0.0842 | likely_benign | 0.0875 | benign | -0.398 | Destabilizing | 0.505 | D | 0.587 | neutral | N | 0.484675659 | None | None | N |
K/S | 0.5133 | ambiguous | 0.5526 | ambiguous | -1.096 | Destabilizing | 0.404 | N | 0.569 | neutral | None | None | None | None | N |
K/T | 0.2557 | likely_benign | 0.285 | benign | -0.779 | Destabilizing | 0.338 | N | 0.597 | neutral | N | 0.478686165 | None | None | N |
K/V | 0.2821 | likely_benign | 0.3288 | benign | -0.009 | Destabilizing | 0.404 | N | 0.613 | neutral | None | None | None | None | N |
K/W | 0.8287 | likely_pathogenic | 0.8575 | pathogenic | -0.411 | Destabilizing | 0.991 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/Y | 0.6903 | likely_pathogenic | 0.7246 | pathogenic | -0.108 | Destabilizing | 0.967 | D | 0.685 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.