Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28282 | 85069;85070;85071 | chr2:178561288;178561287;178561286 | chr2:179426015;179426014;179426013 |
N2AB | 26641 | 80146;80147;80148 | chr2:178561288;178561287;178561286 | chr2:179426015;179426014;179426013 |
N2A | 25714 | 77365;77366;77367 | chr2:178561288;178561287;178561286 | chr2:179426015;179426014;179426013 |
N2B | 19217 | 57874;57875;57876 | chr2:178561288;178561287;178561286 | chr2:179426015;179426014;179426013 |
Novex-1 | 19342 | 58249;58250;58251 | chr2:178561288;178561287;178561286 | chr2:179426015;179426014;179426013 |
Novex-2 | 19409 | 58450;58451;58452 | chr2:178561288;178561287;178561286 | chr2:179426015;179426014;179426013 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 0.939 | N | 0.651 | 0.44 | 0.379193981924 | gnomAD-4.0.0 | 6.84212E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99446E-07 | 0 | 0 |
A/T | rs1703576117 | None | 0.521 | N | 0.591 | 0.121 | 0.259761712551 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/T | rs1703576117 | None | 0.521 | N | 0.591 | 0.121 | 0.259761712551 | gnomAD-4.0.0 | 1.23941E-06 | None | None | None | None | I | None | 1.33486E-05 | 1.66711E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4871 | ambiguous | 0.5138 | ambiguous | -0.738 | Destabilizing | 0.996 | D | 0.623 | neutral | None | None | None | None | I |
A/D | 0.78 | likely_pathogenic | 0.7417 | pathogenic | -0.998 | Destabilizing | 0.884 | D | 0.677 | prob.neutral | N | 0.470216696 | None | None | I |
A/E | 0.6854 | likely_pathogenic | 0.6557 | pathogenic | -1.154 | Destabilizing | 0.742 | D | 0.639 | neutral | None | None | None | None | I |
A/F | 0.4446 | ambiguous | 0.4494 | ambiguous | -1.25 | Destabilizing | 0.953 | D | 0.669 | neutral | None | None | None | None | I |
A/G | 0.264 | likely_benign | 0.2435 | benign | -0.642 | Destabilizing | 0.521 | D | 0.585 | neutral | N | 0.491750773 | None | None | I |
A/H | 0.6865 | likely_pathogenic | 0.6707 | pathogenic | -0.66 | Destabilizing | 0.996 | D | 0.646 | neutral | None | None | None | None | I |
A/I | 0.5345 | ambiguous | 0.5777 | pathogenic | -0.561 | Destabilizing | 0.037 | N | 0.456 | neutral | None | None | None | None | I |
A/K | 0.8717 | likely_pathogenic | 0.8553 | pathogenic | -0.789 | Destabilizing | 0.91 | D | 0.641 | neutral | None | None | None | None | I |
A/L | 0.3557 | ambiguous | 0.3696 | ambiguous | -0.561 | Destabilizing | 0.373 | N | 0.563 | neutral | None | None | None | None | I |
A/M | 0.3808 | ambiguous | 0.3965 | ambiguous | -0.265 | Destabilizing | 0.953 | D | 0.645 | neutral | None | None | None | None | I |
A/N | 0.5773 | likely_pathogenic | 0.5625 | ambiguous | -0.451 | Destabilizing | 0.91 | D | 0.657 | neutral | None | None | None | None | I |
A/P | 0.9587 | likely_pathogenic | 0.9507 | pathogenic | -0.53 | Destabilizing | 0.939 | D | 0.651 | neutral | N | 0.48861412 | None | None | I |
A/Q | 0.6211 | likely_pathogenic | 0.5985 | pathogenic | -0.819 | Destabilizing | 0.91 | D | 0.65 | neutral | None | None | None | None | I |
A/R | 0.7849 | likely_pathogenic | 0.755 | pathogenic | -0.227 | Destabilizing | 0.91 | D | 0.65 | neutral | None | None | None | None | I |
A/S | 0.1011 | likely_benign | 0.0996 | benign | -0.642 | Destabilizing | 0.028 | N | 0.439 | neutral | N | 0.371062152 | None | None | I |
A/T | 0.1721 | likely_benign | 0.1785 | benign | -0.731 | Destabilizing | 0.521 | D | 0.591 | neutral | N | 0.508437953 | None | None | I |
A/V | 0.2698 | likely_benign | 0.3036 | benign | -0.53 | Destabilizing | 0.012 | N | 0.335 | neutral | N | 0.505128289 | None | None | I |
A/W | 0.8575 | likely_pathogenic | 0.8537 | pathogenic | -1.369 | Destabilizing | 0.996 | D | 0.703 | prob.neutral | None | None | None | None | I |
A/Y | 0.6408 | likely_pathogenic | 0.6369 | pathogenic | -1.023 | Destabilizing | 0.984 | D | 0.67 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.