Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28284 | 85075;85076;85077 | chr2:178561282;178561281;178561280 | chr2:179426009;179426008;179426007 |
N2AB | 26643 | 80152;80153;80154 | chr2:178561282;178561281;178561280 | chr2:179426009;179426008;179426007 |
N2A | 25716 | 77371;77372;77373 | chr2:178561282;178561281;178561280 | chr2:179426009;179426008;179426007 |
N2B | 19219 | 57880;57881;57882 | chr2:178561282;178561281;178561280 | chr2:179426009;179426008;179426007 |
Novex-1 | 19344 | 58255;58256;58257 | chr2:178561282;178561281;178561280 | chr2:179426009;179426008;179426007 |
Novex-2 | 19411 | 58456;58457;58458 | chr2:178561282;178561281;178561280 | chr2:179426009;179426008;179426007 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1462392007 | None | 0.896 | N | 0.724 | 0.53 | 0.72338399144 | gnomAD-4.0.0 | 1.59128E-06 | None | None | None | None | N | None | 5.65419E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs1408628454 | None | 0.004 | N | 0.181 | 0.127 | 0.416075642716 | gnomAD-4.0.0 | 3.18249E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71611E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9652 | likely_pathogenic | 0.9714 | pathogenic | -2.266 | Highly Destabilizing | 0.702 | D | 0.686 | prob.neutral | None | None | None | None | N |
I/C | 0.9676 | likely_pathogenic | 0.9728 | pathogenic | -1.457 | Destabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | N |
I/D | 0.9961 | likely_pathogenic | 0.9955 | pathogenic | -2.409 | Highly Destabilizing | 0.996 | D | 0.834 | deleterious | None | None | None | None | N |
I/E | 0.9886 | likely_pathogenic | 0.9887 | pathogenic | -2.362 | Highly Destabilizing | 0.988 | D | 0.817 | deleterious | None | None | None | None | N |
I/F | 0.8435 | likely_pathogenic | 0.8807 | pathogenic | -1.678 | Destabilizing | 0.984 | D | 0.739 | prob.delet. | D | 0.530297268 | None | None | N |
I/G | 0.9918 | likely_pathogenic | 0.9928 | pathogenic | -2.655 | Highly Destabilizing | 0.988 | D | 0.819 | deleterious | None | None | None | None | N |
I/H | 0.9898 | likely_pathogenic | 0.9905 | pathogenic | -1.985 | Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
I/K | 0.9776 | likely_pathogenic | 0.9808 | pathogenic | -1.718 | Destabilizing | 0.988 | D | 0.817 | deleterious | None | None | None | None | N |
I/L | 0.3448 | ambiguous | 0.3951 | ambiguous | -1.221 | Destabilizing | 0.437 | N | 0.441 | neutral | N | 0.519620526 | None | None | N |
I/M | 0.4175 | ambiguous | 0.4715 | ambiguous | -0.847 | Destabilizing | 0.984 | D | 0.701 | prob.neutral | D | 0.544188468 | None | None | N |
I/N | 0.8915 | likely_pathogenic | 0.8455 | pathogenic | -1.642 | Destabilizing | 0.995 | D | 0.827 | deleterious | D | 0.527262755 | None | None | N |
I/P | 0.9431 | likely_pathogenic | 0.9488 | pathogenic | -1.543 | Destabilizing | 0.996 | D | 0.835 | deleterious | None | None | None | None | N |
I/Q | 0.9829 | likely_pathogenic | 0.9842 | pathogenic | -1.802 | Destabilizing | 0.996 | D | 0.83 | deleterious | None | None | None | None | N |
I/R | 0.9742 | likely_pathogenic | 0.9786 | pathogenic | -1.083 | Destabilizing | 0.988 | D | 0.828 | deleterious | None | None | None | None | N |
I/S | 0.9651 | likely_pathogenic | 0.9671 | pathogenic | -2.225 | Highly Destabilizing | 0.984 | D | 0.791 | deleterious | D | 0.529464801 | None | None | N |
I/T | 0.9332 | likely_pathogenic | 0.9375 | pathogenic | -2.062 | Highly Destabilizing | 0.896 | D | 0.724 | prob.delet. | N | 0.519754337 | None | None | N |
I/V | 0.1279 | likely_benign | 0.1322 | benign | -1.543 | Destabilizing | 0.004 | N | 0.181 | neutral | N | 0.481043495 | None | None | N |
I/W | 0.9947 | likely_pathogenic | 0.9955 | pathogenic | -1.887 | Destabilizing | 0.999 | D | 0.8 | deleterious | None | None | None | None | N |
I/Y | 0.9668 | likely_pathogenic | 0.9725 | pathogenic | -1.673 | Destabilizing | 0.996 | D | 0.797 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.