Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28287 | 85084;85085;85086 | chr2:178561273;178561272;178561271 | chr2:179426000;179425999;179425998 |
N2AB | 26646 | 80161;80162;80163 | chr2:178561273;178561272;178561271 | chr2:179426000;179425999;179425998 |
N2A | 25719 | 77380;77381;77382 | chr2:178561273;178561272;178561271 | chr2:179426000;179425999;179425998 |
N2B | 19222 | 57889;57890;57891 | chr2:178561273;178561272;178561271 | chr2:179426000;179425999;179425998 |
Novex-1 | 19347 | 58264;58265;58266 | chr2:178561273;178561272;178561271 | chr2:179426000;179425999;179425998 |
Novex-2 | 19414 | 58465;58466;58467 | chr2:178561273;178561272;178561271 | chr2:179426000;179425999;179425998 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/F | rs1559296734 | None | 0.434 | D | 0.399 | 0.646 | 0.572173585829 | gnomAD-4.0.0 | 3.42107E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49724E-06 | 0 | 0 |
Y/H | rs1406227768 | None | 1.0 | D | 0.752 | 0.841 | 0.733173517768 | gnomAD-4.0.0 | 1.59128E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85806E-06 | 0 | 0 |
Y/N | None | None | 1.0 | D | 0.869 | 0.822 | 0.903800418731 | gnomAD-4.0.0 | 1.59128E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85806E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.998 | likely_pathogenic | 0.9985 | pathogenic | -3.706 | Highly Destabilizing | 0.998 | D | 0.786 | deleterious | None | None | None | None | N |
Y/C | 0.9401 | likely_pathogenic | 0.9554 | pathogenic | -2.017 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | D | 0.667424714 | None | None | N |
Y/D | 0.9975 | likely_pathogenic | 0.9978 | pathogenic | -3.944 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | D | 0.667828322 | None | None | N |
Y/E | 0.9994 | likely_pathogenic | 0.9995 | pathogenic | -3.728 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
Y/F | 0.2834 | likely_benign | 0.3075 | benign | -1.564 | Destabilizing | 0.434 | N | 0.399 | neutral | D | 0.550152999 | None | None | N |
Y/G | 0.9933 | likely_pathogenic | 0.9944 | pathogenic | -4.103 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
Y/H | 0.9856 | likely_pathogenic | 0.9893 | pathogenic | -2.811 | Highly Destabilizing | 1.0 | D | 0.752 | deleterious | D | 0.641886602 | None | None | N |
Y/I | 0.9831 | likely_pathogenic | 0.985 | pathogenic | -2.349 | Highly Destabilizing | 0.999 | D | 0.774 | deleterious | None | None | None | None | N |
Y/K | 0.9993 | likely_pathogenic | 0.9994 | pathogenic | -2.63 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
Y/L | 0.9609 | likely_pathogenic | 0.9659 | pathogenic | -2.349 | Highly Destabilizing | 0.994 | D | 0.715 | prob.delet. | None | None | None | None | N |
Y/M | 0.9877 | likely_pathogenic | 0.9902 | pathogenic | -2.034 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
Y/N | 0.9814 | likely_pathogenic | 0.985 | pathogenic | -3.411 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.667828322 | None | None | N |
Y/P | 0.9995 | likely_pathogenic | 0.9996 | pathogenic | -2.823 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
Y/Q | 0.999 | likely_pathogenic | 0.9992 | pathogenic | -3.145 | Highly Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
Y/R | 0.9972 | likely_pathogenic | 0.9975 | pathogenic | -2.381 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
Y/S | 0.9916 | likely_pathogenic | 0.9935 | pathogenic | -3.7 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.667828322 | None | None | N |
Y/T | 0.9975 | likely_pathogenic | 0.9981 | pathogenic | -3.368 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
Y/V | 0.9737 | likely_pathogenic | 0.9768 | pathogenic | -2.823 | Highly Destabilizing | 0.997 | D | 0.732 | prob.delet. | None | None | None | None | N |
Y/W | 0.8688 | likely_pathogenic | 0.8847 | pathogenic | -0.772 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.