Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28293 | 85102;85103;85104 | chr2:178561255;178561254;178561253 | chr2:179425982;179425981;179425980 |
N2AB | 26652 | 80179;80180;80181 | chr2:178561255;178561254;178561253 | chr2:179425982;179425981;179425980 |
N2A | 25725 | 77398;77399;77400 | chr2:178561255;178561254;178561253 | chr2:179425982;179425981;179425980 |
N2B | 19228 | 57907;57908;57909 | chr2:178561255;178561254;178561253 | chr2:179425982;179425981;179425980 |
Novex-1 | 19353 | 58282;58283;58284 | chr2:178561255;178561254;178561253 | chr2:179425982;179425981;179425980 |
Novex-2 | 19420 | 58483;58484;58485 | chr2:178561255;178561254;178561253 | chr2:179425982;179425981;179425980 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs879026651 | None | 0.988 | N | 0.612 | 0.479 | None | gnomAD-4.0.0 | 1.59137E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85811E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2051 | likely_benign | 0.1798 | benign | -0.959 | Destabilizing | 0.919 | D | 0.493 | neutral | N | 0.48014465 | None | None | N |
E/C | 0.9032 | likely_pathogenic | 0.8751 | pathogenic | -0.586 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
E/D | 0.1446 | likely_benign | 0.1321 | benign | -1.374 | Destabilizing | 0.958 | D | 0.374 | neutral | N | 0.449064363 | None | None | N |
E/F | 0.8579 | likely_pathogenic | 0.8195 | pathogenic | -0.387 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/G | 0.3226 | likely_benign | 0.2951 | benign | -1.371 | Destabilizing | 0.988 | D | 0.612 | neutral | N | 0.481158608 | None | None | N |
E/H | 0.6955 | likely_pathogenic | 0.6401 | pathogenic | -0.746 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
E/I | 0.4762 | ambiguous | 0.3939 | ambiguous | 0.182 | Stabilizing | 0.995 | D | 0.789 | deleterious | None | None | None | None | N |
E/K | 0.3849 | ambiguous | 0.3006 | benign | -0.953 | Destabilizing | 0.067 | N | 0.245 | neutral | N | 0.473882663 | None | None | N |
E/L | 0.4581 | ambiguous | 0.4033 | ambiguous | 0.182 | Stabilizing | 0.991 | D | 0.751 | deleterious | None | None | None | None | N |
E/M | 0.5508 | ambiguous | 0.489 | ambiguous | 0.734 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/N | 0.3694 | ambiguous | 0.316 | benign | -1.386 | Destabilizing | 0.991 | D | 0.637 | neutral | None | None | None | None | N |
E/P | 0.565 | likely_pathogenic | 0.4557 | ambiguous | -0.177 | Destabilizing | 0.995 | D | 0.753 | deleterious | None | None | None | None | N |
E/Q | 0.2341 | likely_benign | 0.1999 | benign | -1.208 | Destabilizing | 0.958 | D | 0.553 | neutral | N | 0.471128522 | None | None | N |
E/R | 0.557 | ambiguous | 0.4721 | ambiguous | -0.705 | Destabilizing | 0.982 | D | 0.625 | neutral | None | None | None | None | N |
E/S | 0.311 | likely_benign | 0.2721 | benign | -1.816 | Destabilizing | 0.968 | D | 0.499 | neutral | None | None | None | None | N |
E/T | 0.4094 | ambiguous | 0.3468 | ambiguous | -1.468 | Destabilizing | 0.991 | D | 0.64 | neutral | None | None | None | None | N |
E/V | 0.2845 | likely_benign | 0.2338 | benign | -0.177 | Destabilizing | 0.988 | D | 0.727 | prob.delet. | N | 0.468979382 | None | None | N |
E/W | 0.9571 | likely_pathogenic | 0.9392 | pathogenic | -0.199 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
E/Y | 0.7868 | likely_pathogenic | 0.7388 | pathogenic | -0.144 | Destabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.