Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28300 | 85123;85124;85125 | chr2:178561234;178561233;178561232 | chr2:179425961;179425960;179425959 |
N2AB | 26659 | 80200;80201;80202 | chr2:178561234;178561233;178561232 | chr2:179425961;179425960;179425959 |
N2A | 25732 | 77419;77420;77421 | chr2:178561234;178561233;178561232 | chr2:179425961;179425960;179425959 |
N2B | 19235 | 57928;57929;57930 | chr2:178561234;178561233;178561232 | chr2:179425961;179425960;179425959 |
Novex-1 | 19360 | 58303;58304;58305 | chr2:178561234;178561233;178561232 | chr2:179425961;179425960;179425959 |
Novex-2 | 19427 | 58504;58505;58506 | chr2:178561234;178561233;178561232 | chr2:179425961;179425960;179425959 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1703551325 | None | 0.998 | N | 0.779 | 0.462 | 0.76634211205 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/P | rs1703551325 | None | 0.998 | N | 0.779 | 0.462 | 0.76634211205 | gnomAD-4.0.0 | 6.57246E-06 | None | None | None | None | N | None | 2.41324E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4977 | ambiguous | 0.4387 | ambiguous | -1.478 | Destabilizing | 0.968 | D | 0.598 | neutral | None | None | None | None | N |
L/C | 0.6586 | likely_pathogenic | 0.6296 | pathogenic | -0.763 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
L/D | 0.9028 | likely_pathogenic | 0.8688 | pathogenic | -0.999 | Destabilizing | 0.995 | D | 0.778 | deleterious | None | None | None | None | N |
L/E | 0.5589 | ambiguous | 0.4889 | ambiguous | -1.017 | Destabilizing | 0.991 | D | 0.771 | deleterious | None | None | None | None | N |
L/F | 0.2722 | likely_benign | 0.2521 | benign | -1.03 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | N |
L/G | 0.7367 | likely_pathogenic | 0.6908 | pathogenic | -1.769 | Destabilizing | 0.991 | D | 0.769 | deleterious | None | None | None | None | N |
L/H | 0.3869 | ambiguous | 0.3337 | benign | -0.941 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
L/I | 0.1175 | likely_benign | 0.1143 | benign | -0.765 | Destabilizing | 0.984 | D | 0.547 | neutral | None | None | None | None | N |
L/K | 0.3855 | ambiguous | 0.335 | benign | -1.035 | Destabilizing | 0.982 | D | 0.697 | prob.neutral | None | None | None | None | N |
L/M | 0.1136 | likely_benign | 0.1049 | benign | -0.565 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | N | 0.425918144 | None | None | N |
L/N | 0.5666 | likely_pathogenic | 0.5144 | ambiguous | -0.803 | Destabilizing | 0.991 | D | 0.778 | deleterious | None | None | None | None | N |
L/P | 0.9645 | likely_pathogenic | 0.9543 | pathogenic | -0.971 | Destabilizing | 0.998 | D | 0.779 | deleterious | N | 0.485118173 | None | None | N |
L/Q | 0.1911 | likely_benign | 0.1579 | benign | -1.011 | Destabilizing | 0.988 | D | 0.757 | deleterious | N | 0.475304028 | None | None | N |
L/R | 0.3419 | ambiguous | 0.2804 | benign | -0.381 | Destabilizing | 0.142 | N | 0.411 | neutral | N | 0.494121862 | None | None | N |
L/S | 0.5655 | likely_pathogenic | 0.4888 | ambiguous | -1.347 | Destabilizing | 0.991 | D | 0.753 | deleterious | None | None | None | None | N |
L/T | 0.3651 | ambiguous | 0.3 | benign | -1.259 | Destabilizing | 0.991 | D | 0.725 | prob.delet. | None | None | None | None | N |
L/V | 0.1239 | likely_benign | 0.1126 | benign | -0.971 | Destabilizing | 0.979 | D | 0.559 | neutral | N | 0.457142341 | None | None | N |
L/W | 0.482 | ambiguous | 0.4299 | ambiguous | -1.091 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
L/Y | 0.5182 | ambiguous | 0.4963 | ambiguous | -0.886 | Destabilizing | 0.998 | D | 0.765 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.