Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28301 | 85126;85127;85128 | chr2:178561231;178561230;178561229 | chr2:179425958;179425957;179425956 |
N2AB | 26660 | 80203;80204;80205 | chr2:178561231;178561230;178561229 | chr2:179425958;179425957;179425956 |
N2A | 25733 | 77422;77423;77424 | chr2:178561231;178561230;178561229 | chr2:179425958;179425957;179425956 |
N2B | 19236 | 57931;57932;57933 | chr2:178561231;178561230;178561229 | chr2:179425958;179425957;179425956 |
Novex-1 | 19361 | 58306;58307;58308 | chr2:178561231;178561230;178561229 | chr2:179425958;179425957;179425956 |
Novex-2 | 19428 | 58507;58508;58509 | chr2:178561231;178561230;178561229 | chr2:179425958;179425957;179425956 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs779856458 | -0.224 | 0.142 | N | 0.392 | 0.148 | 0.330331372229 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/R | rs779856458 | -0.224 | 0.142 | N | 0.392 | 0.148 | 0.330331372229 | gnomAD-4.0.0 | 1.59164E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
K/T | None | None | 0.988 | N | 0.731 | 0.456 | 0.357724736475 | gnomAD-4.0.0 | 1.59164E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85801E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9324 | likely_pathogenic | 0.9268 | pathogenic | -0.638 | Destabilizing | 0.968 | D | 0.615 | neutral | None | None | None | None | N |
K/C | 0.9497 | likely_pathogenic | 0.9522 | pathogenic | -0.58 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/D | 0.9895 | likely_pathogenic | 0.9908 | pathogenic | -0.128 | Destabilizing | 0.995 | D | 0.767 | deleterious | None | None | None | None | N |
K/E | 0.9128 | likely_pathogenic | 0.9142 | pathogenic | 0.008 | Stabilizing | 0.958 | D | 0.556 | neutral | N | 0.509875174 | None | None | N |
K/F | 0.9852 | likely_pathogenic | 0.9862 | pathogenic | -0.2 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/G | 0.972 | likely_pathogenic | 0.972 | pathogenic | -1.026 | Destabilizing | 0.991 | D | 0.653 | neutral | None | None | None | None | N |
K/H | 0.7414 | likely_pathogenic | 0.7452 | pathogenic | -1.301 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
K/I | 0.8951 | likely_pathogenic | 0.8882 | pathogenic | 0.376 | Stabilizing | 0.995 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/L | 0.8357 | likely_pathogenic | 0.8224 | pathogenic | 0.376 | Stabilizing | 0.991 | D | 0.653 | neutral | None | None | None | None | N |
K/M | 0.828 | likely_pathogenic | 0.8082 | pathogenic | 0.171 | Stabilizing | 0.999 | D | 0.751 | deleterious | N | 0.497221721 | None | None | N |
K/N | 0.9701 | likely_pathogenic | 0.97 | pathogenic | -0.578 | Destabilizing | 0.988 | D | 0.697 | prob.neutral | N | 0.481381964 | None | None | N |
K/P | 0.8824 | likely_pathogenic | 0.8809 | pathogenic | 0.068 | Stabilizing | 0.998 | D | 0.772 | deleterious | None | None | None | None | N |
K/Q | 0.5479 | ambiguous | 0.5355 | ambiguous | -0.561 | Destabilizing | 0.988 | D | 0.682 | prob.neutral | N | 0.468202006 | None | None | N |
K/R | 0.1038 | likely_benign | 0.109 | benign | -0.68 | Destabilizing | 0.142 | N | 0.392 | neutral | N | 0.485598379 | None | None | N |
K/S | 0.9684 | likely_pathogenic | 0.9656 | pathogenic | -1.208 | Destabilizing | 0.968 | D | 0.635 | neutral | None | None | None | None | N |
K/T | 0.8628 | likely_pathogenic | 0.8621 | pathogenic | -0.858 | Destabilizing | 0.988 | D | 0.731 | prob.delet. | N | 0.511840831 | None | None | N |
K/V | 0.8769 | likely_pathogenic | 0.8723 | pathogenic | 0.068 | Stabilizing | 0.995 | D | 0.741 | deleterious | None | None | None | None | N |
K/W | 0.9736 | likely_pathogenic | 0.9761 | pathogenic | -0.104 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
K/Y | 0.9562 | likely_pathogenic | 0.958 | pathogenic | 0.164 | Stabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.