Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28305 | 85138;85139;85140 | chr2:178561219;178561218;178561217 | chr2:179425946;179425945;179425944 |
N2AB | 26664 | 80215;80216;80217 | chr2:178561219;178561218;178561217 | chr2:179425946;179425945;179425944 |
N2A | 25737 | 77434;77435;77436 | chr2:178561219;178561218;178561217 | chr2:179425946;179425945;179425944 |
N2B | 19240 | 57943;57944;57945 | chr2:178561219;178561218;178561217 | chr2:179425946;179425945;179425944 |
Novex-1 | 19365 | 58318;58319;58320 | chr2:178561219;178561218;178561217 | chr2:179425946;179425945;179425944 |
Novex-2 | 19432 | 58519;58520;58521 | chr2:178561219;178561218;178561217 | chr2:179425946;179425945;179425944 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.999 | N | 0.612 | 0.445 | 0.544082543865 | gnomAD-4.0.0 | 2.73733E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.63736E-05 | 0 |
T/S | None | None | 0.992 | N | 0.392 | 0.255 | 0.244539031024 | gnomAD-4.0.0 | 6.84332E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15934E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.112 | likely_benign | 0.0976 | benign | -0.253 | Destabilizing | 0.767 | D | 0.219 | neutral | N | 0.50362678 | None | None | I |
T/C | 0.6169 | likely_pathogenic | 0.5665 | pathogenic | -0.336 | Destabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | I |
T/D | 0.6703 | likely_pathogenic | 0.5891 | pathogenic | 0.233 | Stabilizing | 1.0 | D | 0.612 | neutral | None | None | None | None | I |
T/E | 0.6069 | likely_pathogenic | 0.5361 | ambiguous | 0.152 | Stabilizing | 1.0 | D | 0.583 | neutral | None | None | None | None | I |
T/F | 0.5741 | likely_pathogenic | 0.4996 | ambiguous | -0.872 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
T/G | 0.2775 | likely_benign | 0.2583 | benign | -0.34 | Destabilizing | 0.997 | D | 0.541 | neutral | None | None | None | None | I |
T/H | 0.4438 | ambiguous | 0.3816 | ambiguous | -0.523 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | I |
T/I | 0.4061 | ambiguous | 0.3421 | ambiguous | -0.148 | Destabilizing | 0.999 | D | 0.612 | neutral | N | 0.507976594 | None | None | I |
T/K | 0.415 | ambiguous | 0.343 | ambiguous | -0.25 | Destabilizing | 1.0 | D | 0.574 | neutral | None | None | None | None | I |
T/L | 0.2003 | likely_benign | 0.1751 | benign | -0.148 | Destabilizing | 0.997 | D | 0.535 | neutral | None | None | None | None | I |
T/M | 0.172 | likely_benign | 0.1527 | benign | -0.166 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | I |
T/N | 0.1986 | likely_benign | 0.1707 | benign | -0.086 | Destabilizing | 1.0 | D | 0.565 | neutral | D | 0.523983409 | None | None | I |
T/P | 0.5224 | ambiguous | 0.4654 | ambiguous | -0.157 | Destabilizing | 0.999 | D | 0.607 | neutral | N | 0.473376112 | None | None | I |
T/Q | 0.3479 | ambiguous | 0.3061 | benign | -0.265 | Destabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | I |
T/R | 0.3373 | likely_benign | 0.2714 | benign | 0.016 | Stabilizing | 1.0 | D | 0.589 | neutral | None | None | None | None | I |
T/S | 0.1269 | likely_benign | 0.1151 | benign | -0.273 | Destabilizing | 0.992 | D | 0.392 | neutral | N | 0.457640987 | None | None | I |
T/V | 0.2562 | likely_benign | 0.2243 | benign | -0.157 | Destabilizing | 0.997 | D | 0.441 | neutral | None | None | None | None | I |
T/W | 0.8576 | likely_pathogenic | 0.8136 | pathogenic | -0.939 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | I |
T/Y | 0.5734 | likely_pathogenic | 0.5014 | ambiguous | -0.619 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.