Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28306 | 85141;85142;85143 | chr2:178561216;178561215;178561214 | chr2:179425943;179425942;179425941 |
N2AB | 26665 | 80218;80219;80220 | chr2:178561216;178561215;178561214 | chr2:179425943;179425942;179425941 |
N2A | 25738 | 77437;77438;77439 | chr2:178561216;178561215;178561214 | chr2:179425943;179425942;179425941 |
N2B | 19241 | 57946;57947;57948 | chr2:178561216;178561215;178561214 | chr2:179425943;179425942;179425941 |
Novex-1 | 19366 | 58321;58322;58323 | chr2:178561216;178561215;178561214 | chr2:179425943;179425942;179425941 |
Novex-2 | 19433 | 58522;58523;58524 | chr2:178561216;178561215;178561214 | chr2:179425943;179425942;179425941 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs758424234 | -0.518 | 0.581 | N | 0.491 | 0.356 | 0.232513804876 | gnomAD-2.1.1 | 7.65E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.20915E-04 | None | 0 | 0 | 0 |
N/D | rs758424234 | -0.518 | 0.581 | N | 0.491 | 0.356 | 0.232513804876 | gnomAD-4.0.0 | 3.48997E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.91263E-04 | 0 |
N/H | None | None | 0.968 | N | 0.707 | 0.455 | 0.269111216191 | gnomAD-4.0.0 | 6.84308E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99447E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3174 | likely_benign | 0.3003 | benign | -0.415 | Destabilizing | 0.48 | N | 0.61 | neutral | None | None | None | None | N |
N/C | 0.4287 | ambiguous | 0.4265 | ambiguous | 0.34 | Stabilizing | 0.98 | D | 0.819 | deleterious | None | None | None | None | N |
N/D | 0.3271 | likely_benign | 0.2992 | benign | 0.098 | Stabilizing | 0.581 | D | 0.491 | neutral | N | 0.51876959 | None | None | N |
N/E | 0.7447 | likely_pathogenic | 0.7088 | pathogenic | 0.061 | Stabilizing | 0.648 | D | 0.579 | neutral | None | None | None | None | N |
N/F | 0.7062 | likely_pathogenic | 0.7056 | pathogenic | -0.763 | Destabilizing | 0.929 | D | 0.841 | deleterious | None | None | None | None | N |
N/G | 0.444 | ambiguous | 0.4295 | ambiguous | -0.588 | Destabilizing | 0.648 | D | 0.489 | neutral | None | None | None | None | N |
N/H | 0.2149 | likely_benign | 0.205 | benign | -0.61 | Destabilizing | 0.968 | D | 0.707 | prob.neutral | N | 0.472066801 | None | None | N |
N/I | 0.2728 | likely_benign | 0.2589 | benign | -0.044 | Destabilizing | 0.709 | D | 0.833 | deleterious | N | 0.470091791 | None | None | N |
N/K | 0.6777 | likely_pathogenic | 0.6546 | pathogenic | 0.132 | Stabilizing | 0.581 | D | 0.596 | neutral | N | 0.506877728 | None | None | N |
N/L | 0.299 | likely_benign | 0.2865 | benign | -0.044 | Destabilizing | 0.764 | D | 0.729 | prob.delet. | None | None | None | None | N |
N/M | 0.4261 | ambiguous | 0.4081 | ambiguous | 0.386 | Stabilizing | 0.98 | D | 0.789 | deleterious | None | None | None | None | N |
N/P | 0.5548 | ambiguous | 0.5085 | ambiguous | -0.141 | Destabilizing | 0.929 | D | 0.805 | deleterious | None | None | None | None | N |
N/Q | 0.6109 | likely_pathogenic | 0.5858 | pathogenic | -0.371 | Destabilizing | 0.929 | D | 0.715 | prob.delet. | None | None | None | None | N |
N/R | 0.6673 | likely_pathogenic | 0.6482 | pathogenic | 0.206 | Stabilizing | 0.866 | D | 0.697 | prob.neutral | None | None | None | None | N |
N/S | 0.1115 | likely_benign | 0.1125 | benign | -0.132 | Destabilizing | 0.41 | N | 0.455 | neutral | D | 0.523116617 | None | None | N |
N/T | 0.1888 | likely_benign | 0.1817 | benign | -0.022 | Destabilizing | 0.004 | N | 0.316 | neutral | N | 0.50430157 | None | None | N |
N/V | 0.2383 | likely_benign | 0.2247 | benign | -0.141 | Destabilizing | 0.764 | D | 0.749 | deleterious | None | None | None | None | N |
N/W | 0.8964 | likely_pathogenic | 0.8886 | pathogenic | -0.702 | Destabilizing | 0.993 | D | 0.809 | deleterious | None | None | None | None | N |
N/Y | 0.3009 | likely_benign | 0.2958 | benign | -0.448 | Destabilizing | 0.908 | D | 0.824 | deleterious | N | 0.500869025 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.