Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28309 | 85150;85151;85152 | chr2:178561207;178561206;178561205 | chr2:179425934;179425933;179425932 |
N2AB | 26668 | 80227;80228;80229 | chr2:178561207;178561206;178561205 | chr2:179425934;179425933;179425932 |
N2A | 25741 | 77446;77447;77448 | chr2:178561207;178561206;178561205 | chr2:179425934;179425933;179425932 |
N2B | 19244 | 57955;57956;57957 | chr2:178561207;178561206;178561205 | chr2:179425934;179425933;179425932 |
Novex-1 | 19369 | 58330;58331;58332 | chr2:178561207;178561206;178561205 | chr2:179425934;179425933;179425932 |
Novex-2 | 19436 | 58531;58532;58533 | chr2:178561207;178561206;178561205 | chr2:179425934;179425933;179425932 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1383001734 | 0.134 | 0.994 | N | 0.431 | 0.371 | 0.340510301474 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2536 | likely_benign | 0.2412 | benign | -0.212 | Destabilizing | 0.994 | D | 0.511 | neutral | N | 0.511651617 | None | None | N |
E/C | 0.9155 | likely_pathogenic | 0.9142 | pathogenic | -0.368 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/D | 0.0781 | likely_benign | 0.0718 | benign | -0.602 | Destabilizing | 0.104 | N | 0.131 | neutral | N | 0.433289621 | None | None | N |
E/F | 0.9047 | likely_pathogenic | 0.903 | pathogenic | 0.374 | Stabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
E/G | 0.1887 | likely_benign | 0.1708 | benign | -0.493 | Destabilizing | 0.994 | D | 0.535 | neutral | N | 0.51282784 | None | None | N |
E/H | 0.6519 | likely_pathogenic | 0.6111 | pathogenic | 0.746 | Stabilizing | 1.0 | D | 0.622 | neutral | None | None | None | None | N |
E/I | 0.6791 | likely_pathogenic | 0.6918 | pathogenic | 0.524 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/K | 0.321 | likely_benign | 0.2891 | benign | 0.226 | Stabilizing | 0.994 | D | 0.431 | neutral | N | 0.503013491 | None | None | N |
E/L | 0.6727 | likely_pathogenic | 0.6686 | pathogenic | 0.524 | Stabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/M | 0.6769 | likely_pathogenic | 0.6673 | pathogenic | 0.348 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/N | 0.2305 | likely_benign | 0.2 | benign | -0.483 | Destabilizing | 0.998 | D | 0.573 | neutral | None | None | None | None | N |
E/P | 0.8927 | likely_pathogenic | 0.8886 | pathogenic | 0.3 | Stabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
E/Q | 0.2463 | likely_benign | 0.2275 | benign | -0.352 | Destabilizing | 0.998 | D | 0.564 | neutral | N | 0.486121241 | None | None | N |
E/R | 0.5297 | ambiguous | 0.494 | ambiguous | 0.656 | Stabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
E/S | 0.2708 | likely_benign | 0.2445 | benign | -0.633 | Destabilizing | 0.992 | D | 0.448 | neutral | None | None | None | None | N |
E/T | 0.3345 | likely_benign | 0.3141 | benign | -0.378 | Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
E/V | 0.4248 | ambiguous | 0.4404 | ambiguous | 0.3 | Stabilizing | 0.999 | D | 0.673 | neutral | N | 0.517252225 | None | None | N |
E/W | 0.9641 | likely_pathogenic | 0.9596 | pathogenic | 0.61 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/Y | 0.7718 | likely_pathogenic | 0.7533 | pathogenic | 0.654 | Stabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.