Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28310 | 85153;85154;85155 | chr2:178561204;178561203;178561202 | chr2:179425931;179425930;179425929 |
N2AB | 26669 | 80230;80231;80232 | chr2:178561204;178561203;178561202 | chr2:179425931;179425930;179425929 |
N2A | 25742 | 77449;77450;77451 | chr2:178561204;178561203;178561202 | chr2:179425931;179425930;179425929 |
N2B | 19245 | 57958;57959;57960 | chr2:178561204;178561203;178561202 | chr2:179425931;179425930;179425929 |
Novex-1 | 19370 | 58333;58334;58335 | chr2:178561204;178561203;178561202 | chr2:179425931;179425930;179425929 |
Novex-2 | 19437 | 58534;58535;58536 | chr2:178561204;178561203;178561202 | chr2:179425931;179425930;179425929 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs765062342 | 0.505 | 0.994 | N | 0.777 | 0.439 | 0.523082183605 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 5.6E-05 | None | 0 | None | 0 | 0 | 0 |
T/I | rs765062342 | 0.505 | 0.994 | N | 0.777 | 0.439 | 0.523082183605 | gnomAD-4.0.0 | 3.18382E-06 | None | None | None | None | N | None | 0 | 2.28686E-05 | None | 0 | 2.77824E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1429 | likely_benign | 0.1307 | benign | -0.621 | Destabilizing | 0.825 | D | 0.461 | neutral | N | 0.501109288 | None | None | N |
T/C | 0.3107 | likely_benign | 0.3114 | benign | -0.405 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
T/D | 0.5014 | ambiguous | 0.4973 | ambiguous | -0.756 | Destabilizing | 0.991 | D | 0.704 | prob.neutral | None | None | None | None | N |
T/E | 0.4555 | ambiguous | 0.4125 | ambiguous | -0.58 | Destabilizing | 0.991 | D | 0.693 | prob.neutral | None | None | None | None | N |
T/F | 0.6001 | likely_pathogenic | 0.5689 | pathogenic | -0.514 | Destabilizing | 0.995 | D | 0.799 | deleterious | None | None | None | None | N |
T/G | 0.3167 | likely_benign | 0.308 | benign | -0.996 | Destabilizing | 0.938 | D | 0.599 | neutral | None | None | None | None | N |
T/H | 0.4251 | ambiguous | 0.4055 | ambiguous | -1.047 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
T/I | 0.4313 | ambiguous | 0.3919 | ambiguous | 0.343 | Stabilizing | 0.994 | D | 0.777 | deleterious | N | 0.51484545 | None | None | N |
T/K | 0.3651 | ambiguous | 0.3415 | ambiguous | -0.134 | Destabilizing | 0.988 | D | 0.705 | prob.neutral | N | 0.490905071 | None | None | N |
T/L | 0.1272 | likely_benign | 0.1175 | benign | 0.343 | Stabilizing | 0.968 | D | 0.579 | neutral | None | None | None | None | N |
T/M | 0.1151 | likely_benign | 0.1055 | benign | 0.119 | Stabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
T/N | 0.0757 | likely_benign | 0.0722 | benign | -0.783 | Destabilizing | 0.991 | D | 0.647 | neutral | None | None | None | None | N |
T/P | 0.1303 | likely_benign | 0.1176 | benign | 0.053 | Stabilizing | 0.994 | D | 0.779 | deleterious | N | 0.473775095 | None | None | N |
T/Q | 0.3371 | likely_benign | 0.3097 | benign | -0.569 | Destabilizing | 0.991 | D | 0.793 | deleterious | None | None | None | None | N |
T/R | 0.2929 | likely_benign | 0.2712 | benign | -0.284 | Destabilizing | 0.988 | D | 0.777 | deleterious | N | 0.478027829 | None | None | N |
T/S | 0.1746 | likely_benign | 0.1685 | benign | -1.025 | Destabilizing | 0.234 | N | 0.411 | neutral | N | 0.50594468 | None | None | N |
T/V | 0.3135 | likely_benign | 0.2847 | benign | 0.053 | Stabilizing | 0.968 | D | 0.506 | neutral | None | None | None | None | N |
T/W | 0.8615 | likely_pathogenic | 0.8358 | pathogenic | -0.723 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
T/Y | 0.482 | ambiguous | 0.4391 | ambiguous | -0.264 | Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.