Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28319 | 85180;85181;85182 | chr2:178561177;178561176;178561175 | chr2:179425904;179425903;179425902 |
N2AB | 26678 | 80257;80258;80259 | chr2:178561177;178561176;178561175 | chr2:179425904;179425903;179425902 |
N2A | 25751 | 77476;77477;77478 | chr2:178561177;178561176;178561175 | chr2:179425904;179425903;179425902 |
N2B | 19254 | 57985;57986;57987 | chr2:178561177;178561176;178561175 | chr2:179425904;179425903;179425902 |
Novex-1 | 19379 | 58360;58361;58362 | chr2:178561177;178561176;178561175 | chr2:179425904;179425903;179425902 |
Novex-2 | 19446 | 58561;58562;58563 | chr2:178561177;178561176;178561175 | chr2:179425904;179425903;179425902 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs903892310 | -0.684 | 0.958 | N | 0.645 | 0.507 | 0.393623145366 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/A | rs903892310 | -0.684 | 0.958 | N | 0.645 | 0.507 | 0.393623145366 | gnomAD-4.0.0 | 6.36685E-06 | None | None | None | None | N | None | 0 | 9.14746E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | None | None | 0.067 | N | 0.199 | 0.166 | 0.191931220699 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/K | None | None | 0.958 | N | 0.635 | 0.401 | 0.384919354899 | gnomAD-4.0.0 | 1.59175E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88865E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3658 | ambiguous | 0.3179 | benign | -0.742 | Destabilizing | 0.958 | D | 0.645 | neutral | N | 0.468606853 | None | None | N |
E/C | 0.977 | likely_pathogenic | 0.9746 | pathogenic | -0.343 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/D | 0.6527 | likely_pathogenic | 0.6494 | pathogenic | -0.982 | Destabilizing | 0.067 | N | 0.199 | neutral | N | 0.497666248 | None | None | N |
E/F | 0.9835 | likely_pathogenic | 0.9799 | pathogenic | -0.531 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/G | 0.5347 | ambiguous | 0.4904 | ambiguous | -1.039 | Destabilizing | 0.988 | D | 0.633 | neutral | N | 0.491830124 | None | None | N |
E/H | 0.9345 | likely_pathogenic | 0.9168 | pathogenic | -0.744 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
E/I | 0.82 | likely_pathogenic | 0.7815 | pathogenic | 0.044 | Stabilizing | 0.995 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/K | 0.5085 | ambiguous | 0.424 | ambiguous | -0.433 | Destabilizing | 0.958 | D | 0.635 | neutral | N | 0.488587667 | None | None | N |
E/L | 0.8902 | likely_pathogenic | 0.8639 | pathogenic | 0.044 | Stabilizing | 0.995 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/M | 0.8441 | likely_pathogenic | 0.8035 | pathogenic | 0.407 | Stabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | N |
E/N | 0.8132 | likely_pathogenic | 0.7904 | pathogenic | -0.741 | Destabilizing | 0.982 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/P | 0.7532 | likely_pathogenic | 0.746 | pathogenic | -0.197 | Destabilizing | 0.995 | D | 0.673 | neutral | None | None | None | None | N |
E/Q | 0.3258 | likely_benign | 0.2803 | benign | -0.683 | Destabilizing | 0.994 | D | 0.693 | prob.neutral | N | 0.477320267 | None | None | N |
E/R | 0.6912 | likely_pathogenic | 0.6153 | pathogenic | -0.222 | Destabilizing | 0.995 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/S | 0.6012 | likely_pathogenic | 0.5592 | ambiguous | -1.001 | Destabilizing | 0.968 | D | 0.65 | neutral | None | None | None | None | N |
E/T | 0.6707 | likely_pathogenic | 0.6112 | pathogenic | -0.768 | Destabilizing | 0.991 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/V | 0.6118 | likely_pathogenic | 0.5598 | ambiguous | -0.197 | Destabilizing | 0.994 | D | 0.677 | prob.neutral | N | 0.484993269 | None | None | N |
E/W | 0.9954 | likely_pathogenic | 0.9944 | pathogenic | -0.37 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/Y | 0.9751 | likely_pathogenic | 0.9702 | pathogenic | -0.303 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.