Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28334 | 85225;85226;85227 | chr2:178561132;178561131;178561130 | chr2:179425859;179425858;179425857 |
N2AB | 26693 | 80302;80303;80304 | chr2:178561132;178561131;178561130 | chr2:179425859;179425858;179425857 |
N2A | 25766 | 77521;77522;77523 | chr2:178561132;178561131;178561130 | chr2:179425859;179425858;179425857 |
N2B | 19269 | 58030;58031;58032 | chr2:178561132;178561131;178561130 | chr2:179425859;179425858;179425857 |
Novex-1 | 19394 | 58405;58406;58407 | chr2:178561132;178561131;178561130 | chr2:179425859;179425858;179425857 |
Novex-2 | 19461 | 58606;58607;58608 | chr2:178561132;178561131;178561130 | chr2:179425859;179425858;179425857 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.684 | N | 0.35 | 0.244 | 0.28722502521 | gnomAD-4.0.0 | 6.84207E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15934E-05 | 0 |
D/Y | None | None | 0.979 | N | 0.553 | 0.481 | 0.44153150616 | gnomAD-4.0.0 | 6.84207E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99447E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2091 | likely_benign | 0.1863 | benign | -0.116 | Destabilizing | 0.309 | N | 0.489 | neutral | N | 0.430318313 | None | None | I |
D/C | 0.6335 | likely_pathogenic | 0.6295 | pathogenic | 0.242 | Stabilizing | 0.996 | D | 0.536 | neutral | None | None | None | None | I |
D/E | 0.1989 | likely_benign | 0.1909 | benign | -0.218 | Destabilizing | 0.012 | N | 0.194 | neutral | N | 0.401035556 | None | None | I |
D/F | 0.6595 | likely_pathogenic | 0.6517 | pathogenic | -0.302 | Destabilizing | 0.984 | D | 0.552 | neutral | None | None | None | None | I |
D/G | 0.0977 | likely_benign | 0.0988 | benign | -0.263 | Destabilizing | 0.001 | N | 0.267 | neutral | N | 0.200906637 | None | None | I |
D/H | 0.3874 | ambiguous | 0.3605 | ambiguous | -0.089 | Destabilizing | 0.979 | D | 0.553 | neutral | N | 0.468452626 | None | None | I |
D/I | 0.5938 | likely_pathogenic | 0.5686 | pathogenic | 0.205 | Stabilizing | 0.984 | D | 0.551 | neutral | None | None | None | None | I |
D/K | 0.5038 | ambiguous | 0.4589 | ambiguous | 0.47 | Stabilizing | 0.742 | D | 0.462 | neutral | None | None | None | None | I |
D/L | 0.4551 | ambiguous | 0.4317 | ambiguous | 0.205 | Stabilizing | 0.854 | D | 0.577 | neutral | None | None | None | None | I |
D/M | 0.7061 | likely_pathogenic | 0.6864 | pathogenic | 0.346 | Stabilizing | 0.996 | D | 0.531 | neutral | None | None | None | None | I |
D/N | 0.1034 | likely_benign | 0.1041 | benign | 0.358 | Stabilizing | 0.684 | D | 0.35 | neutral | N | 0.419794675 | None | None | I |
D/P | 0.899 | likely_pathogenic | 0.8574 | pathogenic | 0.119 | Stabilizing | 0.947 | D | 0.543 | neutral | None | None | None | None | I |
D/Q | 0.4289 | ambiguous | 0.3841 | ambiguous | 0.347 | Stabilizing | 0.742 | D | 0.385 | neutral | None | None | None | None | I |
D/R | 0.5146 | ambiguous | 0.4633 | ambiguous | 0.548 | Stabilizing | 0.91 | D | 0.57 | neutral | None | None | None | None | I |
D/S | 0.1461 | likely_benign | 0.1389 | benign | 0.236 | Stabilizing | 0.543 | D | 0.357 | neutral | None | None | None | None | I |
D/T | 0.3841 | ambiguous | 0.3547 | ambiguous | 0.342 | Stabilizing | 0.854 | D | 0.511 | neutral | None | None | None | None | I |
D/V | 0.381 | ambiguous | 0.3534 | ambiguous | 0.119 | Stabilizing | 0.815 | D | 0.577 | neutral | N | 0.467759193 | None | None | I |
D/W | 0.9175 | likely_pathogenic | 0.9154 | pathogenic | -0.263 | Destabilizing | 0.996 | D | 0.547 | neutral | None | None | None | None | I |
D/Y | 0.2955 | likely_benign | 0.2892 | benign | -0.081 | Destabilizing | 0.979 | D | 0.553 | neutral | N | 0.44925079 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.