Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28338 | 85237;85238;85239 | chr2:178561120;178561119;178561118 | chr2:179425847;179425846;179425845 |
N2AB | 26697 | 80314;80315;80316 | chr2:178561120;178561119;178561118 | chr2:179425847;179425846;179425845 |
N2A | 25770 | 77533;77534;77535 | chr2:178561120;178561119;178561118 | chr2:179425847;179425846;179425845 |
N2B | 19273 | 58042;58043;58044 | chr2:178561120;178561119;178561118 | chr2:179425847;179425846;179425845 |
Novex-1 | 19398 | 58417;58418;58419 | chr2:178561120;178561119;178561118 | chr2:179425847;179425846;179425845 |
Novex-2 | 19465 | 58618;58619;58620 | chr2:178561120;178561119;178561118 | chr2:179425847;179425846;179425845 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.801 | N | 0.327 | 0.137 | 0.187945064343 | gnomAD-4.0.0 | 1.59116E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85798E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1074 | likely_benign | 0.1024 | benign | -0.669 | Destabilizing | 0.022 | N | 0.183 | neutral | N | 0.498490319 | None | None | N |
E/C | 0.6928 | likely_pathogenic | 0.7084 | pathogenic | -0.433 | Destabilizing | 0.998 | D | 0.341 | neutral | None | None | None | None | N |
E/D | 0.1161 | likely_benign | 0.1237 | benign | -0.61 | Destabilizing | 0.801 | D | 0.327 | neutral | N | 0.511035541 | None | None | N |
E/F | 0.5829 | likely_pathogenic | 0.5745 | pathogenic | -0.164 | Destabilizing | 0.974 | D | 0.379 | neutral | None | None | None | None | N |
E/G | 0.1416 | likely_benign | 0.1299 | benign | -0.927 | Destabilizing | 0.801 | D | 0.369 | neutral | N | 0.490447318 | None | None | N |
E/H | 0.3647 | ambiguous | 0.3463 | ambiguous | 0.168 | Stabilizing | 0.974 | D | 0.421 | neutral | None | None | None | None | N |
E/I | 0.2227 | likely_benign | 0.2158 | benign | 0.005 | Stabilizing | 0.728 | D | 0.433 | neutral | None | None | None | None | N |
E/K | 0.0916 | likely_benign | 0.0849 | benign | -0.009 | Destabilizing | 0.454 | N | 0.309 | neutral | N | 0.497316883 | None | None | N |
E/L | 0.2136 | likely_benign | 0.2071 | benign | 0.005 | Stabilizing | 0.525 | D | 0.387 | neutral | None | None | None | None | N |
E/M | 0.2904 | likely_benign | 0.2827 | benign | 0.081 | Stabilizing | 0.974 | D | 0.354 | neutral | None | None | None | None | N |
E/N | 0.1916 | likely_benign | 0.1964 | benign | -0.606 | Destabilizing | 0.842 | D | 0.423 | neutral | None | None | None | None | N |
E/P | 0.2756 | likely_benign | 0.2559 | benign | -0.2 | Destabilizing | 0.016 | N | 0.223 | neutral | None | None | None | None | N |
E/Q | 0.1062 | likely_benign | 0.0964 | benign | -0.51 | Destabilizing | 0.051 | N | 0.138 | neutral | N | 0.475078541 | None | None | N |
E/R | 0.1758 | likely_benign | 0.1568 | benign | 0.41 | Stabilizing | 0.728 | D | 0.4 | neutral | None | None | None | None | N |
E/S | 0.1562 | likely_benign | 0.147 | benign | -0.771 | Destabilizing | 0.525 | D | 0.327 | neutral | None | None | None | None | N |
E/T | 0.1882 | likely_benign | 0.1733 | benign | -0.543 | Destabilizing | 0.842 | D | 0.37 | neutral | None | None | None | None | N |
E/V | 0.1406 | likely_benign | 0.1346 | benign | -0.2 | Destabilizing | 0.051 | N | 0.273 | neutral | N | 0.472560553 | None | None | N |
E/W | 0.8295 | likely_pathogenic | 0.815 | pathogenic | 0.134 | Stabilizing | 0.998 | D | 0.421 | neutral | None | None | None | None | N |
E/Y | 0.4419 | ambiguous | 0.4425 | ambiguous | 0.11 | Stabilizing | 0.991 | D | 0.385 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.