Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28365 | 85318;85319;85320 | chr2:178561039;178561038;178561037 | chr2:179425766;179425765;179425764 |
N2AB | 26724 | 80395;80396;80397 | chr2:178561039;178561038;178561037 | chr2:179425766;179425765;179425764 |
N2A | 25797 | 77614;77615;77616 | chr2:178561039;178561038;178561037 | chr2:179425766;179425765;179425764 |
N2B | 19300 | 58123;58124;58125 | chr2:178561039;178561038;178561037 | chr2:179425766;179425765;179425764 |
Novex-1 | 19425 | 58498;58499;58500 | chr2:178561039;178561038;178561037 | chr2:179425766;179425765;179425764 |
Novex-2 | 19492 | 58699;58700;58701 | chr2:178561039;178561038;178561037 | chr2:179425766;179425765;179425764 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | rs774971602 | 0.641 | 0.896 | N | 0.364 | 0.257 | 0.16115917748 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.3071E-04 | None | 0 | 0 | 0 |
D/H | rs774971602 | 0.641 | 0.896 | N | 0.364 | 0.257 | 0.16115917748 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07211E-04 | 0 |
D/H | rs774971602 | 0.641 | 0.896 | N | 0.364 | 0.257 | 0.16115917748 | gnomAD-4.0.0 | 7.43607E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47597E-07 | 1.2077E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3749 | ambiguous | 0.3015 | benign | -0.014 | Destabilizing | 0.004 | N | 0.261 | neutral | N | 0.451462152 | None | None | I |
D/C | 0.8644 | likely_pathogenic | 0.8135 | pathogenic | -0.051 | Destabilizing | 0.977 | D | 0.327 | neutral | None | None | None | None | I |
D/E | 0.2272 | likely_benign | 0.1931 | benign | -0.299 | Destabilizing | 0.01 | N | 0.275 | neutral | N | 0.455840328 | None | None | I |
D/F | 0.9085 | likely_pathogenic | 0.869 | pathogenic | -0.023 | Destabilizing | 0.92 | D | 0.343 | neutral | None | None | None | None | I |
D/G | 0.2376 | likely_benign | 0.1717 | benign | -0.16 | Destabilizing | 0.004 | N | 0.222 | neutral | N | 0.469655312 | None | None | I |
D/H | 0.5091 | ambiguous | 0.4327 | ambiguous | 0.443 | Stabilizing | 0.896 | D | 0.364 | neutral | N | 0.458805986 | None | None | I |
D/I | 0.8222 | likely_pathogenic | 0.7612 | pathogenic | 0.306 | Stabilizing | 0.85 | D | 0.364 | neutral | None | None | None | None | I |
D/K | 0.6188 | likely_pathogenic | 0.5121 | ambiguous | 0.493 | Stabilizing | 0.447 | N | 0.404 | neutral | None | None | None | None | I |
D/L | 0.7573 | likely_pathogenic | 0.6866 | pathogenic | 0.306 | Stabilizing | 0.447 | N | 0.391 | neutral | None | None | None | None | I |
D/M | 0.8774 | likely_pathogenic | 0.8385 | pathogenic | 0.176 | Stabilizing | 0.992 | D | 0.322 | neutral | None | None | None | None | I |
D/N | 0.1681 | likely_benign | 0.1422 | benign | 0.155 | Stabilizing | 0.549 | D | 0.385 | neutral | N | 0.511888398 | None | None | I |
D/P | 0.8588 | likely_pathogenic | 0.8161 | pathogenic | 0.22 | Stabilizing | 0.92 | D | 0.386 | neutral | None | None | None | None | I |
D/Q | 0.5382 | ambiguous | 0.4709 | ambiguous | 0.178 | Stabilizing | 0.059 | N | 0.233 | neutral | None | None | None | None | I |
D/R | 0.6578 | likely_pathogenic | 0.5636 | ambiguous | 0.7 | Stabilizing | 0.617 | D | 0.377 | neutral | None | None | None | None | I |
D/S | 0.2339 | likely_benign | 0.1861 | benign | 0.089 | Stabilizing | 0.25 | N | 0.387 | neutral | None | None | None | None | I |
D/T | 0.4734 | ambiguous | 0.4032 | ambiguous | 0.209 | Stabilizing | 0.617 | D | 0.398 | neutral | None | None | None | None | I |
D/V | 0.5851 | likely_pathogenic | 0.5035 | ambiguous | 0.22 | Stabilizing | 0.379 | N | 0.393 | neutral | N | 0.470162291 | None | None | I |
D/W | 0.9535 | likely_pathogenic | 0.9375 | pathogenic | 0.05 | Stabilizing | 0.992 | D | 0.379 | neutral | None | None | None | None | I |
D/Y | 0.5166 | ambiguous | 0.4191 | ambiguous | 0.211 | Stabilizing | 0.963 | D | 0.351 | neutral | N | 0.48219016 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.