Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28373 | 85342;85343;85344 | chr2:178561015;178561014;178561013 | chr2:179425742;179425741;179425740 |
N2AB | 26732 | 80419;80420;80421 | chr2:178561015;178561014;178561013 | chr2:179425742;179425741;179425740 |
N2A | 25805 | 77638;77639;77640 | chr2:178561015;178561014;178561013 | chr2:179425742;179425741;179425740 |
N2B | 19308 | 58147;58148;58149 | chr2:178561015;178561014;178561013 | chr2:179425742;179425741;179425740 |
Novex-1 | 19433 | 58522;58523;58524 | chr2:178561015;178561014;178561013 | chr2:179425742;179425741;179425740 |
Novex-2 | 19500 | 58723;58724;58725 | chr2:178561015;178561014;178561013 | chr2:179425742;179425741;179425740 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs770787056 | -0.192 | 0.006 | N | 0.198 | 0.071 | 0.0401082797425 | gnomAD-2.1.1 | 2.5E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 5.48E-05 | 0 |
E/D | rs770787056 | -0.192 | 0.006 | N | 0.198 | 0.071 | 0.0401082797425 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
E/D | rs770787056 | -0.192 | 0.006 | N | 0.198 | 0.071 | 0.0401082797425 | gnomAD-4.0.0 | 1.7971E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.28853E-05 | 1.09791E-05 | 1.60108E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2489 | likely_benign | 0.2218 | benign | -0.528 | Destabilizing | 0.698 | D | 0.472 | neutral | N | 0.477029281 | None | None | I |
E/C | 0.9039 | likely_pathogenic | 0.8852 | pathogenic | -0.115 | Destabilizing | 0.998 | D | 0.682 | prob.neutral | None | None | None | None | I |
E/D | 0.1212 | likely_benign | 0.1025 | benign | -0.558 | Destabilizing | 0.006 | N | 0.198 | neutral | N | 0.460038213 | None | None | I |
E/F | 0.8828 | likely_pathogenic | 0.8587 | pathogenic | -0.373 | Destabilizing | 0.978 | D | 0.599 | neutral | None | None | None | None | I |
E/G | 0.2315 | likely_benign | 0.2038 | benign | -0.755 | Destabilizing | 0.822 | D | 0.474 | neutral | N | 0.505599931 | None | None | I |
E/H | 0.6038 | likely_pathogenic | 0.5573 | ambiguous | -0.261 | Destabilizing | 0.998 | D | 0.396 | neutral | None | None | None | None | I |
E/I | 0.7061 | likely_pathogenic | 0.6772 | pathogenic | 0.044 | Stabilizing | 0.956 | D | 0.594 | neutral | None | None | None | None | I |
E/K | 0.2161 | likely_benign | 0.2008 | benign | 0.135 | Stabilizing | 0.822 | D | 0.443 | neutral | N | 0.456176321 | None | None | I |
E/L | 0.6548 | likely_pathogenic | 0.6177 | pathogenic | 0.044 | Stabilizing | 0.915 | D | 0.519 | neutral | None | None | None | None | I |
E/M | 0.6195 | likely_pathogenic | 0.5876 | pathogenic | 0.229 | Stabilizing | 0.998 | D | 0.559 | neutral | None | None | None | None | I |
E/N | 0.2897 | likely_benign | 0.252 | benign | -0.212 | Destabilizing | 0.86 | D | 0.419 | neutral | None | None | None | None | I |
E/P | 0.9679 | likely_pathogenic | 0.9561 | pathogenic | -0.126 | Destabilizing | 0.978 | D | 0.455 | neutral | None | None | None | None | I |
E/Q | 0.1995 | likely_benign | 0.1898 | benign | -0.176 | Destabilizing | 0.97 | D | 0.431 | neutral | N | 0.455415852 | None | None | I |
E/R | 0.38 | ambiguous | 0.3519 | ambiguous | 0.35 | Stabilizing | 0.956 | D | 0.414 | neutral | None | None | None | None | I |
E/S | 0.2438 | likely_benign | 0.2233 | benign | -0.383 | Destabilizing | 0.754 | D | 0.425 | neutral | None | None | None | None | I |
E/T | 0.319 | likely_benign | 0.3076 | benign | -0.201 | Destabilizing | 0.043 | N | 0.32 | neutral | None | None | None | None | I |
E/V | 0.4414 | ambiguous | 0.4142 | ambiguous | -0.126 | Destabilizing | 0.89 | D | 0.453 | neutral | N | 0.48751344 | None | None | I |
E/W | 0.9558 | likely_pathogenic | 0.9396 | pathogenic | -0.197 | Destabilizing | 0.998 | D | 0.705 | prob.neutral | None | None | None | None | I |
E/Y | 0.7598 | likely_pathogenic | 0.707 | pathogenic | -0.127 | Destabilizing | 0.993 | D | 0.551 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.