Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28390 | 85393;85394;85395 | chr2:178560964;178560963;178560962 | chr2:179425691;179425690;179425689 |
N2AB | 26749 | 80470;80471;80472 | chr2:178560964;178560963;178560962 | chr2:179425691;179425690;179425689 |
N2A | 25822 | 77689;77690;77691 | chr2:178560964;178560963;178560962 | chr2:179425691;179425690;179425689 |
N2B | 19325 | 58198;58199;58200 | chr2:178560964;178560963;178560962 | chr2:179425691;179425690;179425689 |
Novex-1 | 19450 | 58573;58574;58575 | chr2:178560964;178560963;178560962 | chr2:179425691;179425690;179425689 |
Novex-2 | 19517 | 58774;58775;58776 | chr2:178560964;178560963;178560962 | chr2:179425691;179425690;179425689 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs267599032 | None | 0.994 | N | 0.712 | 0.574 | 0.660933345464 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0903 | likely_benign | 0.0909 | benign | -0.618 | Destabilizing | 0.63 | D | 0.435 | neutral | N | 0.518631596 | None | None | N |
S/C | 0.0967 | likely_benign | 0.0986 | benign | -0.373 | Destabilizing | 0.999 | D | 0.652 | neutral | N | 0.496335662 | None | None | N |
S/D | 0.4725 | ambiguous | 0.4428 | ambiguous | -0.132 | Destabilizing | 0.916 | D | 0.485 | neutral | None | None | None | None | N |
S/E | 0.4777 | ambiguous | 0.4554 | ambiguous | -0.07 | Destabilizing | 0.845 | D | 0.428 | neutral | None | None | None | None | N |
S/F | 0.1653 | likely_benign | 0.1566 | benign | -0.689 | Destabilizing | 0.994 | D | 0.712 | prob.delet. | N | 0.496488242 | None | None | N |
S/G | 0.1434 | likely_benign | 0.133 | benign | -0.926 | Destabilizing | 0.916 | D | 0.455 | neutral | None | None | None | None | N |
S/H | 0.2709 | likely_benign | 0.2633 | benign | -1.322 | Destabilizing | 0.997 | D | 0.664 | neutral | None | None | None | None | N |
S/I | 0.1376 | likely_benign | 0.1366 | benign | 0.108 | Stabilizing | 0.987 | D | 0.691 | prob.neutral | None | None | None | None | N |
S/K | 0.5918 | likely_pathogenic | 0.5723 | pathogenic | -0.419 | Destabilizing | 0.033 | N | 0.385 | neutral | None | None | None | None | N |
S/L | 0.0918 | likely_benign | 0.0898 | benign | 0.108 | Stabilizing | 0.916 | D | 0.626 | neutral | None | None | None | None | N |
S/M | 0.1817 | likely_benign | 0.174 | benign | 0.15 | Stabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
S/N | 0.1769 | likely_benign | 0.1642 | benign | -0.595 | Destabilizing | 0.916 | D | 0.491 | neutral | None | None | None | None | N |
S/P | 0.9327 | likely_pathogenic | 0.9253 | pathogenic | -0.097 | Destabilizing | 0.983 | D | 0.651 | neutral | N | 0.513932938 | None | None | N |
S/Q | 0.4374 | ambiguous | 0.4163 | ambiguous | -0.568 | Destabilizing | 0.975 | D | 0.565 | neutral | None | None | None | None | N |
S/R | 0.4934 | ambiguous | 0.4676 | ambiguous | -0.492 | Destabilizing | 0.95 | D | 0.604 | neutral | None | None | None | None | N |
S/T | 0.0738 | likely_benign | 0.0741 | benign | -0.52 | Destabilizing | 0.892 | D | 0.441 | neutral | N | 0.419718183 | None | None | N |
S/V | 0.1475 | likely_benign | 0.1477 | benign | -0.097 | Destabilizing | 0.975 | D | 0.606 | neutral | None | None | None | None | N |
S/W | 0.3141 | likely_benign | 0.2882 | benign | -0.76 | Destabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | N |
S/Y | 0.152 | likely_benign | 0.1462 | benign | -0.418 | Destabilizing | 0.994 | D | 0.71 | prob.delet. | N | 0.496082172 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.